RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 GFRA2O00451 464 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 PES1O00541 588 aaKnown RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 AP5Z1O43299 807 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 TIMM44O43615 452 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 NDUFS2O75306 463 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 ZNF217O75362 1048 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 GNA15P30679 374 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 GPD2P43304 727 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 ACADSBP45954 432 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 SLC11A2P49281 568 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 TBX4P57082 545 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 RPL6Q02878 288 aaKnown RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 STARD3Q14849 445 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 EXOC3L4Q17RC7 722 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 KIAA1211LQ6NV74 962 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 GJB7Q6PEY0 223 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 TRIM65Q6PJ69 517 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 FAM114A1Q8IWE2 563 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 DDX1Q92499 740 aaKnown RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 GABRG3Q99928 467 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 ELOVL2Q9NXB9 296 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 CALCOCO1Q9P1Z2 691 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 DACH1Q9UI36 760 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 PLA2G4CQ9UP65 541 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 SLC27A6Q9Y2P4 619 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 MAP1BP46821 2468 aaKnown RBP9.39□□□□□ -0.91
LMO3-222ENST00000540445 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 C4orf47A7E2U8 309 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 NPC1O15118 1278 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 SART1O43290 800 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 TBL1XO60907 577 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 NDUFV2P19404 249 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PON1P27169 355 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PTGER3P43115 390 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 ZNF132P52740 706 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 ZNF445P59923 1031 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 IRX4P78413 519 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 APBA1Q02410 837 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PTK2Q05397 1052 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 HSP90AA4PQ58FG1 418 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 SPDYCQ5MJ68 293 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 DENND1BQ6P3S1 775 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 RFWD3Q6PCD5 774 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 CCDC117Q8IWD4 279 aaPredicted RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 FAM217AQ8IXS0 508 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 RGL4Q8IZJ4 473 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 SORCS1Q8WY21 1168 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PIWIL1Q96J94 861 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 MRGPRX1Q96LB2 322 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 MED15Q96RN5 788 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 DDX50Q9BQ39 737 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 LSM14BQ9BX40 385 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 ACP6Q9NPH0 428 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 STIM2Q9P246 746 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 THAP10Q9P2Z0 257 aaPredicted RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 APEX2Q9UBZ4 518 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 NAALADL1Q9UQQ1 740 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
LMO3-222ENST00000540445 NYNRINQ9P2P1 1898 aaKnown RBP9.38□□□□□ -0.91
LMO3-222ENST00000540445 FRYQ5TBA9 3013 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 LNP1A1A4G5 178 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 TYW5A2RUC4 315 aaKnown RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 ACSL4O60488 711 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 LATS1O95835 1130 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 CFIP05156 583 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 EPHX1P07099 455 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 ACADMP11310 421 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 ITPKAP23677 461 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 HOXD9P28356 352 aaPredicted RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 KRT9P35527 623 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 DPP6P42658 865 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 IL12RB1P42701 662 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 ZNF33AQ06730 810 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 ZNF234Q14588 700 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 EIF4HQ15056 248 aaKnown RBP9.37□□□□□ -0.91
LMO3-222ENST00000540445 MAN2A1Q16706 1144 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 UAP1L1Q3KQV9 507 aa9.37□□□□□ -0.91
LMO3-222ENST00000540445 DPCR1Q3MIW9 517 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms