RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 CPNE8Q86YQ8 564 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 RRN3Q9NYV6 651 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 ZMYND8Q9ULU4 1186 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-203ENST00000540357 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
DNMT1-203ENST00000540357 PRDX6P30041 224 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 CCNA1P78396 465 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 ORC1Q13415 861 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 MPP2Q14168 576 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 CATSPER4Q7RTX7 472 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 CLEC4FQ8N1N0 589 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 HTR3CQ8WXA8 447 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 DCUN1D1Q96GG9 259 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 EBF3Q9H4W6 596 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
DNMT1-203ENST00000540357 A0A096LPK6 155 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ZNF554Q86TJ5 538 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 NCLNQ969V3 563 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 WNK4Q96J92 1243 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ASTN2O75129 1339 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-203ENST00000540357 MICAL2O94851 1124 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 HMGCRP04035 888 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-203ENST00000540357 VPS72Q15906 364 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 NPNTQ6UXI9 565 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 PAIP1Q9H074 479 aaKnown RBP13.36□□□□□ -0.27
DNMT1-203ENST00000540357 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
DNMT1-203ENST00000540357 POLIQ9UNA4 740 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 MGAT1P26572 445 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 C21orf59P57076 290 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 CERKQ8TCT0 537 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 LENG9Q96B70 501 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 RNF157Q96PX1 679 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 OSBPL11Q9BXB4 747 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 PRDM16Q9HAZ2 1276 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ACOT9Q9Y305 439 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 H0Y626 953 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 KLF11O14901 512 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 DDHD2O94830 711 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 TRIM16O95361 564 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 PPP1R14BQ96C90 147 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 EPB41L4BQ9H329 900 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 NMRAL1Q9HBL8 299 aa13.36□□□□□ -0.27
DNMT1-203ENST00000540357 IARS2Q9NSE4 1012 aaKnown RBP13.36□□□□□ -0.27
DNMT1-203ENST00000540357 UBDO15205 165 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 SNX2O60749 519 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CETPP11597 493 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CCDC130P13994 396 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 ANKRD22Q5VYY1 191 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 DENND1BQ6P3S1 775 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 TMCO5AQ8N6Q1 288 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 SERAC1Q96JX3 654 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 UBE2OQ9C0C9 1292 aaKnown RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 GPR88Q9GZN0 384 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 TMEM134Q9H6X4 195 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CCDC166P0CW27 439 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 ITGB5P18084 799 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PPARGP37231 505 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 HSD17B4P51659 736 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CDK18Q07002 472 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PRMT9Q6P2P2 845 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CEP19Q96LK0 163 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PNPLA3Q9NST1 481 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 TNPO2O14787 897 aaKnown RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 MAP3K13O43283 966 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 OCM2P0CE71 109 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 OCMP0CE72 109 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 GYS1P13807 737 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 VANGL2Q9ULK5 521 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 FASP25445 335 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PTPN7P35236 360 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 NEK2P51955 445 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 PKNOX1P55347 436 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 NOMO1Q15155 1222 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 DGKDQ16760 1214 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 SAMD4BQ5PRF9 694 aaKnown RBP13.35□□□□□ -0.27
DNMT1-203ENST00000540357 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
DNMT1-203ENST00000540357 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms