RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 LPAL2Q16609 132 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 DCAF6Q58WW2 860 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 ZNF513Q8N8E2 541 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 TMEM35BQ8NCS4 154 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 DDI1Q8WTU0 396 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 NOX5Q96PH1 765 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 ACOX2Q99424 681 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 ADAM33Q9BZ11 813 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 CBX8Q9HC52 389 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SMG5Q9UPR3 1016 aaKnown RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 CEP83Q9Y592 693 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 EP300Q09472 2414 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 ACSL4O60488 711 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 LATS1O95835 1130 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 TRUB2O95900 331 aaKnown RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 WASP42768 502 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 NNTQ13423 1086 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 CRY1Q16526 586 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 ADGRF1Q5T601 910 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 OTUD1Q5VV17 481 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 NAA35Q5VZE5 725 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 DCLK2Q8N568 766 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 CAMKK1Q8N5S9 505 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 WFDC5Q8TCV5 224 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 IPO4Q8TEX9 1081 aaKnown RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 CPA5Q8WXQ8 436 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 PRICKLE1Q96MT3 831 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 NAP1L5Q96NT1 182 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 SYNCQ9H7C4 482 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 ASNSD1Q9NWL6 643 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 STARD13Q9Y3M8 1113 aa15.67■□□□□ 0.1
UBE3B-212ENST00000540230 PTPRZ1P23471 2315 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-212ENST00000540230 HSF2BPO75031 334 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 CYBBP04839 570 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 GLI1P08151 1106 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 TFE3P19532 575 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-212ENST00000540230 STAT1P42224 750 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 GABRB2P47870 512 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 SLC6A3Q01959 620 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 ZSCAN23Q3MJ62 389 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 MPPE1Q53F39 396 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 ZC3H12AQ5D1E8 599 aaKnown RBP15.66■□□□□ 0.1
UBE3B-212ENST00000540230 EFHC1Q5JVL4 640 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 TMEM215Q68D42 235 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 SLC26A9Q7LBE3 791 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 XYLT1Q86Y38 959 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 UNC45BQ8IWX7 931 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 MDGA1Q8NFP4 955 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 TSTD1Q8NFU3 115 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 CCDC26Q8TAB7 109 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 ERLEC1Q96DZ1 483 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 TPSD1Q9BZJ3 242 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 NUCKS1Q9H1E3 243 aaKnown RBP15.66■□□□□ 0.1
UBE3B-212ENST00000540230 SLC27A6Q9Y2P4 619 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 GVINP1Q7Z2Y8 2422 aa15.66■□□□□ 0.1
UBE3B-212ENST00000540230 SYNJ2BP-COX16A0A087WUM0 186 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 AXIN1O15169 862 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 DAB1O75553 588 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 APBB3O95704 486 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 CYP1A1P04798 512 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-212ENST00000540230 CDR2Q01850 454 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 ARID5AQ03989 594 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 PREPLQ4J6C6 727 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-212ENST00000540230 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 ANO7Q6IWH7 933 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 PRR23BQ6ZRT6 265 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 ERICH1Q86X53 443 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-212ENST00000540230 TMA16Q96EY4 203 aaKnown RBP15.65■□□□□ 0.1
UBE3B-212ENST00000540230 PCDHB18PQ96TA0 734 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 TRIM62Q9BVG3 475 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 COX16Q9P0S2 106 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 DAAM1Q9Y4D1 1078 aa15.65■□□□□ 0.1
UBE3B-212ENST00000540230 CCDC163A0A0D9SF12 145 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 A0A1B0GTH6 734 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 WASH3PC4AMC7 463 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 LSM8O95777 96 aaKnown RBP15.64■□□□□ 0.09
UBE3B-212ENST00000540230 HLA-FP30511 346 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 SLC11A2P49281 568 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 DGKEP52429 567 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 RNASE9P60153 205 aaKnown RBP15.64■□□□□ 0.09
UBE3B-212ENST00000540230 SIM2Q14190 667 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-212ENST00000540230 HSF5Q4G112 596 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-212ENST00000540230 EOGTQ5NDL2 527 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 RNF43Q68DV7 783 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 TRNP1Q6NT89 227 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 RASSF3Q86WH2 238 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 ZNF677Q86XU0 584 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 AZIN2Q96A70 460 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 C18orf8Q96DM3 657 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 FAM204AQ9H8W3 233 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 DDIT4Q9NX09 232 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 CACNA2D2Q9NY47 1150 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms