RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 CORO1AP31146 461 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 KIF11P52732 1056 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 BCAT1P54687 386 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 IL9RQ01113 521 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 AMPD3Q01432 767 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 RTP5Q14D33 572 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 FAM26FQ5R3K3 315 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 GPR155Q7Z3F1 870 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 CPXM2Q8N436 756 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 PARD3BQ8TEW8 1205 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 DDI1Q8WTU0 396 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 BAP1Q92560 729 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 CYFIP2Q96F07 1278 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 FCRL3Q96P31 734 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 TMEM245Q9H330 911 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 SGK2Q9HBY8 427 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 HMGXB4Q9UGU5 601 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 MAST4O15021 2626 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 NUMA1Q14980 2115 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 TEX51A0A1B0GUA7 166 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 VPS37CA5D8V6 355 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 CAPN8A6NHC0 703 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 ENC1O14682 589 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 VILLO15195 856 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 STX6O43752 255 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 RFPL3O75679 317 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 LDOC1O95751 146 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 DNTTP04053 509 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 RPN1P04843 607 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 HMBSP08397 361 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 C21orf59P57076 290 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 RPS14P62263 151 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 RACK1P63244 317 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 ASIC1P78348 528 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 PDE4CQ08493 712 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 EFEMP1Q12805 493 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 DENND1CQ8IV53 801 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 TAF4BQ92750 862 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 CNDP2Q96KP4 475 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 ORAI3Q9BRQ5 295 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 RASAL2Q9UJF2 1139 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 USP3Q9Y6I4 520 aa12.18□□□□□ -0.46
CLSTN3-209ENST00000539982 COL5A1P20908 1838 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 CLDN6P56747 220 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 CFHR1Q03591 330 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 EHHADHQ08426 723 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 E2F4Q16254 413 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 PRAMEF14Q5SWL7 426 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 GATAD2AQ86YP4 633 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 FAM217AQ8IXS0 508 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 GOLGA1Q92805 767 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 FGF11Q92914 225 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 SKA1Q96BD8 255 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 ELF4Q99607 663 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 PRSS16Q9NQE7 514 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 PTPRQQ9UMZ3 2332 aa12.17□□□□□ -0.46
CLSTN3-209ENST00000539982 MUC22E2RYF6 1773 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 J3QKU1 62 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 CBX4O00257 560 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ASS1P00966 412 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 IGHV4-34P06331 123 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ITGAVP06756 1048 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 PDCP20941 246 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ABCB4P21439 1286 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 HLA-FP30511 346 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ASPAP45381 313 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 DNAJC3Q13217 504 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 KNOP1Q1ED39 458 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ZACNQ401N2 412 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 TTC31Q49AM3 519 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 MPPE1Q53F39 396 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 FBXL19Q6PCT2 694 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 UNC13DQ70J99 1090 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 ZNF366Q8N895 744 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 SAP25Q8TEE9 199 aa12.16□□□□□ -0.46
CLSTN3-209ENST00000539982 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms