RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CASQ2O14958 399 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 HBP1O60381 514 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 SIN3BO75182 1162 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 METTL18O95568 372 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CYP2C8P10632 490 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PGAM1P18669 254 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PHKA2P46019 1235 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 HARS2P49590 506 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CDO1Q16878 200 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 EEF1DP3Q658K8 133 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 JADE1Q6IE81 842 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 LBX2Q6XYB7 198 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 TMEM126BQ8IUX1 230 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PSTKQ8IV42 348 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 STON2Q8WXE9 905 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 GPR20Q99678 358 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 EBF4Q9BQW3 602 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 NGRNQ9NPE2 291 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 ETAA1Q9NY74 926 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 COMMD3-BMI1R4GMX3 469 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 AP1G1O43747 822 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UGT1A9O60656 530 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UPP2O95045 317 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UQCRBP14927 111 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 HK2P52789 917 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 NDST1P52848 882 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 OSTNP61366 133 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 GRM2Q14416 872 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PKDCCQ504Y2 493 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 RASIP1Q5U651 963 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 FOXB2Q5VYV0 432 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-209ENST00000539584 KCNK16Q96T55 309 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 SPATA16Q9BXB7 569 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 EPB41L1Q9H4G0 881 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UGT1A7Q9HAW7 530 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UGT1A10Q9HAW8 530 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 UGT1A8Q9HAW9 530 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 ADAM28Q9UKQ2 775 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 PPM1HQ9ULR3 514 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 AFG3L2Q9Y4W6 797 aa13.66□□□□□ -0.22
UBE3B-209ENST00000539584 A0A0A0MRY4 1105 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 SMIM31A0A1B0GVY4 71 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 PFKMP08237 780 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 PABPC4LP0CB38 370 aaKnown RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 POLE2P56282 527 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 FRG1Q14331 258 aaKnown RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 FAXCQ5TGI0 409 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 APOBEC3FQ8IUX4 373 aaKnown RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 LRRC71Q8N4P6 559 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 TFB1MQ8WVM0 346 aaKnown RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 ISL2Q96A47 359 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 CLPTM1LQ96KA5 538 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 SPATA13Q96N96 652 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 COPG2Q9UBF2 871 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 PPP1R1BQ9UD71 204 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-209ENST00000539584 CDH22Q9UJ99 828 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 ARHGAP26Q9UNA1 814 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 LCTP09848 1927 aa13.65□□□□□ -0.22
UBE3B-209ENST00000539584 GPR25O00155 361 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 SLC22A2O15244 555 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 OPHN1O60890 802 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ALDOAP04075 364 aaKnown RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 UBTFL6P0CB48 400 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 GSTT1P30711 240 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 IDH3AP50213 366 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 HDAC4P56524 1084 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ABCE1P61221 599 aaKnown RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 CUL3Q13618 768 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PDE1CQ14123 709 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PCLAFQ15004 111 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms