RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MEI4A8MW99 385 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 FCHO1O14526 889 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CBX6O95503 412 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ETS1P14921 441 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ADCYAP1R1P41586 468 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 NEK2P51955 445 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CDH18Q13634 790 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MTFR1Q15390 333 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 PACS2Q86VP3 889 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 SRPK1Q96SB4 655 aaKnown RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 RBBP8Q99708 897 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 HIPK3Q9H422 1215 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 NT5MQ9NPB1 228 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ARMCX1Q9P291 453 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MRPL42Q9Y6G3 142 aaKnown RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 DEAF1O75398 565 aaPredicted RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 INHAP05111 366 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CYP3A4P08684 503 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MGAT1P26572 445 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MIPP30301 263 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ADIGQ0VDE8 80 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 LRRC8BQ6P9F7 803 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CCDC149Q6ZUS6 474 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MRIQ9BWK5 157 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MYLK2Q9H1R3 596 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 TBC1D23Q9NUY8 699 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 FZD1Q9UP38 647 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 EVPLLA8MZ36 301 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ADRA1DP25100 572 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 DDX39BQ13838 428 aaKnown RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 PPP4R4Q6NUP7 873 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 NIPA1Q7RTP0 329 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 PTAR1Q7Z6K3 402 aaPredicted RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 B4GALNT2Q8NHY0 566 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 OTUB1Q96FW1 271 aaPredicted RBP14.91□□□□□ -0.02
CACNB1-206ENST00000539338 RICTORQ6R327 1708 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 LACTBL1A8MY62 500 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 F5H5T6 163 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 NR5A2O00482 541 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 MEIS2O14770 477 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 THP07101 528 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ADRB2P07550 413 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF23P17027 643 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 SLC1A6P48664 564 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CCDC81Q6ZN84 652 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 ZCCHC23Q6ZST2 131 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CCDC126Q96EE4 140 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 APOPT1Q96IL0 206 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 FAR2Q96K12 515 aa14.91□□□□□ -0.02
CACNB1-206ENST00000539338 CFAP99D6REC4 459 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 SLC11A2P49281 568 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 UBE3AQ05086 875 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 ADAM32Q8TC27 787 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 GFM2Q969S9 779 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF541Q9H0D2 1346 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 M0R3G1 203 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 FBXO21O94952 628 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 SOAT1P35610 550 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 HSPA13P48723 471 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 TBL3Q12788 808 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 MFSD10Q14728 455 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 POU5F2Q8N7G0 328 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 DIS3LQ8TF46 1054 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF75CPQ92670 426 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 CATSPER2Q96P56 530 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 PRPF18Q99633 342 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 DDX43Q9NXZ2 648 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 RNF225M0QZC1 329 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 GPR142Q7Z601 462 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 HTR3CQ8WXA8 447 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 NEUROG2Q9H2A3 272 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 EXOSC4Q9NPD3 245 aaKnown RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 NCKIPSDQ9NZQ3 722 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 KCNK1O00180 336 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 IRF6O14896 467 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 DAB1O75553 588 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 PSMD10O75832 226 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 TGFB3P10600 412 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 IYDQ6PHW0 289 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 SFMBT1Q9UHJ3 866 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 PNMA8BQ9ULN7 279 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 VPS9D1Q9Y2B5 631 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 VPS26AO75436 327 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 PSEN2P49810 448 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 OXNAD1Q96HP4 312 aaPredicted RBP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 WDR18Q9BV38 432 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
CACNB1-206ENST00000539338 FAM198AQ9UFP1 575 aa14.9□□□□□ -0.02
CACNB1-206ENST00000539338 AOC2O75106 756 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ATP9AO75110 1047 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 USP1O94782 785 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms