RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 RETREG1Q9H6L5 497 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 PRDM16Q9HAZ2 1276 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 ZFP14Q9HCL3 533 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 ARFGAP3Q9NP61 516 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 OGFRQ9NZT2 677 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 STIM2Q9P246 746 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 SNX12Q9UMY4 172 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 USP15Q9Y4E8 981 aaPredicted RBP10.63□□□□□ -0.71
CLPB-210ENST00000539148 ALG6Q9Y672 507 aa10.63□□□□□ -0.71
CLPB-210ENST00000539148 BRWD1Q9NSI6 2320 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 FAM170AA1A519 330 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 C2orf78A6NCI8 922 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 BUB1BO60566 1050 aaPredicted RBP10.62□□□□□ -0.71
CLPB-210ENST00000539148 MOCS3O95396 460 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 CYBBP04839 570 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 FYNP06241 537 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 LTBRP36941 435 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 CXCR3P49682 368 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 RBM10P98175 930 aaKnown RBP10.62□□□□□ -0.71
CLPB-210ENST00000539148 CYP4F8P98187 520 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 ELF2Q15723 593 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 GLIPR1L2Q4G1C9 344 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 ERMARDQ5T6L9 678 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 CCDC181Q5TID7 509 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 TMEM150AQ86TG1 271 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 TAC4Q86UU9 113 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 NPAS3Q8IXF0 933 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 YAF2Q8IY57 180 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 TDRD5Q8NAT2 981 aaKnown RBP10.62□□□□□ -0.71
CLPB-210ENST00000539148 ZSCAN18Q8TBC5 510 aaPredicted RBP10.62□□□□□ -0.71
CLPB-210ENST00000539148 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLPB-210ENST00000539148 SUSD6Q92537 303 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 FGF13Q92913 245 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 EXOC4Q96A65 974 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 PIWIL1Q96J94 861 aaKnown RBP10.62□□□□□ -0.71
CLPB-210ENST00000539148 PBKQ96KB5 322 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 HAPLN3Q96S86 360 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 EPAS1Q99814 870 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 SLC46A2Q9BY10 475 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 TRPV4Q9HBA0 871 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 RAB21Q9UL25 225 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 USP18Q9UMW8 372 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 CPQQ9Y646 472 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 DOCK8Q8NF50 2099 aa10.62□□□□□ -0.71
CLPB-210ENST00000539148 SYNJ2BP-COX16A0A087WUM0 186 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 KCNU1A8MYU2 1149 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 MDM4O15151 490 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 MBTPS2O43462 519 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 LRCH4O75427 683 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 PALMO75781 387 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 IGLV3-25P01717 112 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 LAMP2P13473 410 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 CEBPBP17676 345 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 COMTP21964 271 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 ARL4AP40617 200 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 COPS2P61201 443 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 NTHL1P78549 312 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 SCAPQ12770 1279 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 NR1H3Q13133 447 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 PDK2Q15119 407 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 RPS6KA1Q15418 735 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 SLC5A9Q2M3M2 681 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 RABGAP1LQ5R372 815 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 TTC39BQ5VTQ0 682 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 WDR93Q6P2C0 686 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 HTR3DQ70Z44 454 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 VSIG1Q86XK7 387 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 DNAAF5Q86Y56 855 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 DEPDC1BQ8WUY9 529 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 TCEAL4Q96EI5 215 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 C1orf74Q96LT6 269 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 NAP1L3Q99457 506 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 PHF7Q9BWX1 381 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 KLF16Q9BXK1 252 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 TKTL2Q9H0I9 626 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 RCOR3Q9P2K3 495 aaPredicted RBP10.61□□□□□ -0.71
CLPB-210ENST00000539148 SFMBT1Q9UHJ3 866 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
CLPB-210ENST00000539148 H3BQ06 376 aaPredicted RBP10.6□□□□□ -0.71
CLPB-210ENST00000539148 DAPK3O43293 454 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 ZRANB2O95218 330 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLPB-210ENST00000539148 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 GJA1P17302 382 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 MIPP30301 263 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 ADRA1BP35368 520 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 CCR2P41597 374 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 OXCT1P55809 520 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 HDAC4P56524 1084 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 RWDD2BP57060 319 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 DLX2Q07687 328 aaPredicted RBP10.6□□□□□ -0.71
CLPB-210ENST00000539148 KRT81Q14533 505 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 PDGFRLQ15198 375 aa10.6□□□□□ -0.71
CLPB-210ENST00000539148 C15orf59Q2T9L4 293 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms