RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
RTN3-209ENST00000538995 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
RTN3-209ENST00000538995 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
RTN3-209ENST00000538995 ATG2BQ96BY7 2078 aa12.04□□□□□ -0.48
RTN3-209ENST00000538995 MYOFQ9NZM1 2061 aa12.04□□□□□ -0.48
RTN3-209ENST00000538995 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 CAPN9O14815 690 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 DCLK1O15075 740 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 TIMM44O43615 452 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 ACSL4O60488 711 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 FYNP06241 537 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 ZNF806P0C7X5 589 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 GBP1P32455 592 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 MPLP40238 635 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 YWHAZP63104 245 aaKnown RBP12.03□□□□□ -0.48
RTN3-209ENST00000538995 ENPP2Q13822 863 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 GEN1Q17RS7 908 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 RSPO4Q2I0M5 234 aaPredicted RBP12.03□□□□□ -0.48
RTN3-209ENST00000538995 SPDYCQ5MJ68 293 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 PLA2G2CQ5R387 149 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 CDKAL1Q5VV42 579 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 DPY19L2P1Q6NXN4 242 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTN3-209ENST00000538995 TMA16Q96EY4 203 aaKnown RBP12.03□□□□□ -0.48
RTN3-209ENST00000538995 SLC39A13Q96H72 371 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 ARRDC1-AS1Q9H2J1 176 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 ZDHHC4Q9NPG8 344 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 ANO10Q9NW15 660 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 THAP10Q9P2Z0 257 aaPredicted RBP12.03□□□□□ -0.48
RTN3-209ENST00000538995 AJAP1Q9UKB5 411 aaPredicted RBP12.03□□□□□ -0.48
RTN3-209ENST00000538995 DAAM1Q9Y4D1 1078 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
RTN3-209ENST00000538995 SPAG17Q6Q759 2223 aa12.02□□□□□ -0.48
RTN3-209ENST00000538995 BCLAF3A2AJT9 711 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 TYW5A2RUC4 315 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 FOXN3O00409 490 aaPredicted RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 PES1O00541 588 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 HSF2BPO75031 334 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 ZNF217O75362 1048 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 IGLV3-25P01717 112 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 TPM2P07951 284 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 UCHL3P15374 230 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 GABRG2P18507 467 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 KRT9P35527 623 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 STARD3Q14849 445 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 STX1AQ16623 288 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 HSP90AA4PQ58FG1 418 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 FAM133BQ5BKY9 247 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 KLHDC7AQ5VTJ3 777 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 TAC4Q86UU9 113 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 HJURPQ8NCD3 748 aaPredicted RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 PPP1R13BQ96KQ4 1090 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 CPXM1Q96SM3 734 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 ACOX2Q99424 681 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 NAA15Q9BXJ9 866 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 ELOVL2Q9NXB9 296 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 CACNA2D2Q9NY47 1150 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
RTN3-209ENST00000538995 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.02□□□□□ -0.49
RTN3-209ENST00000538995 TSPAN3O60637 253 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 APOEP02649 317 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 SLC2A3P11169 496 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 NDUFV2P19404 249 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 BCKDHBP21953 392 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 HLA-FP30511 346 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 CDH5P33151 784 aaPredicted RBP12.01□□□□□ -0.49
RTN3-209ENST00000538995 CLCN1P35523 988 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 DPP6P42658 865 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 WASP42768 502 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 LIMK1P53667 647 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 MYL5Q02045 173 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 MTA1Q13330 715 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 RAPGEF1Q13905 1077 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 EFHC1Q5JVL4 640 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 CCDC183Q5T5S1 534 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 PIK3R6Q5UE93 754 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 C11orf57Q6ZUT1 292 aaPredicted RBP12.01□□□□□ -0.49
RTN3-209ENST00000538995 LPCAT2Q7L5N7 544 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 DGLUCYQ7Z3D6 616 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 KIAA0907Q7Z7F0 614 aaPredicted RBP12.01□□□□□ -0.49
RTN3-209ENST00000538995 SLC47A2Q86VL8 602 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 ZDHHC17Q8IUH5 632 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 PASD1Q8IV76 773 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 AHI1Q8N157 1196 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 PGBD3Q8N328 593 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 WDTC1Q8N5D0 677 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
RTN3-209ENST00000538995 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms