RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
CPNE8-203ENST00000538596 FRMD8Q9BZ67 464 aaPredicted RBP12.35□□□□□ -0.43
CPNE8-203ENST00000538596 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
CPNE8-203ENST00000538596 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
CPNE8-203ENST00000538596 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
CPNE8-203ENST00000538596 MEI4A8MW99 385 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 NVLO15381 856 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 ALDOAP04075 364 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 CRHR1P34998 444 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 FASTKD1Q53R41 847 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 UCMAQ8WVF2 138 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 USP6NLQ92738 828 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 ZNF778Q96MU6 729 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 QKIQ96PU8 341 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SYT17Q9BSW7 474 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 MOCS1Q9NZB8 636 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SEPT10Q9P0V9 454 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 EMCNQ9ULC0 261 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 KIF1CO43896 1103 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 MFSD11O43934 449 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SNNO75324 88 aaPredicted RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 MGAT1P26572 445 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 GRM5P41594 1212 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 GTF2A2P52657 109 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 RABGGTBP53611 331 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 STX3Q13277 289 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 LAMC2Q13753 1193 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 STILQ15468 1287 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 CRLF3Q8IUI8 442 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 HTR3CQ8WXA8 447 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SCG3Q8WXD2 468 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 OPTNQ96CV9 577 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 LRRC39Q96DD0 335 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 NXF3Q9H4D5 531 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 SETD4Q9NVD3 440 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
CPNE8-203ENST00000538596 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
CPNE8-203ENST00000538596 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.43
CPNE8-203ENST00000538596 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 TPP1O14773 563 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SPTLC1O15269 473 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 LUC7L3O95232 432 aaKnown RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 LMNAP02545 664 aaKnown RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 TPSB2P20231 275 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 AP1B1Q10567 949 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 CBLBQ13191 982 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 TPSAB1Q15661 275 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 GRIK4Q16099 956 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 N4BP2L1Q5TBK1 243 aaPredicted RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SLC25A41Q8N5S1 370 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SLC2A14Q8TDB8 520 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SH3TC2Q8TF17 1288 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 CENPIQ92674 756 aaPredicted RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 THTPAQ9BU02 230 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 PLXNA1Q9UIW2 1896 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 CXCL11O14625 94 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 VHLP40337 213 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 SEMA5AQ13591 1074 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 PPP1R14CQ8TAE6 165 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 TFB1MQ8WVM0 346 aaKnown RBP12.33□□□□□ -0.44
CPNE8-203ENST00000538596 KBTBD7Q8WVZ9 684 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 MTBPQ96DY7 904 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 ZNF358Q9NW07 568 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 ZFATQ9P243 1243 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
CPNE8-203ENST00000538596 A6NHS1 94 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ASB14A6NK59 587 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TKTP29401 623 aaKnown RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ARRB2P32121 409 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PTPN9P43378 593 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SLC34A1Q06495 639 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 LRRC74BQ6ZQY2 392 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SLC26A9Q7LBE3 791 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 PPTC7Q8NI37 304 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 STMN2Q93045 179 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 FAM149B1Q96BN6 582 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 ATXN7L3BQ96GX2 97 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SNX27Q96L92 541 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 OSMRQ99650 979 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 SHCBP1LQ9BZQ2 653 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 WWP1Q9H0M0 922 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MROH8Q9H579 483 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 XAB2Q9HCS7 855 aaKnown RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
CPNE8-203ENST00000538596 CORO1CQ9ULV4 474 aaPredicted RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
CPNE8-203ENST00000538596 MAP3K13O43283 966 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms