RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SORCS1Q8WY21 1168 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 DDX1Q92499 740 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 SLC39A13Q96H72 371 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 STK33Q9BYT3 514 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 POPDC2Q9HBU9 364 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 NLRC4Q9NPP4 1024 aa14.85□□□□□ -0.03
UBE3B-206ENST00000536398 MYO18AQ92614 2054 aaKnown RBP14.85□□□□□ -0.03
UBE3B-206ENST00000536398 SDK1Q7Z5N4 2213 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 A0A1W2PQF6 199 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 TCRBV21S2A2A0A5A6 115 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 CAPN9O14815 690 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
UBE3B-206ENST00000536398 ACSL4O60488 711 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 GFPT2O94808 682 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 MOCS2O96007 188 aaPredicted RBP14.84□□□□□ -0.03
UBE3B-206ENST00000536398 IGLV3-25P01717 112 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 NTSR1P30989 418 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 BPIFB4P59827 614 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 RING1Q06587 406 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 SYCP1Q15431 976 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 CCDC6Q16204 474 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 MPPE1Q53F39 396 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 ZC3H12AQ5D1E8 599 aaKnown RBP14.84□□□□□ -0.03
UBE3B-206ENST00000536398 NUGGCQ68CJ6 796 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 TMEM215Q68D42 235 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 LAIR1Q6GTX8 287 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 NUDT18Q6ZVK8 323 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 CACNA2D4Q7Z3S7 1137 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.84□□□□□ -0.03
UBE3B-206ENST00000536398 CHPFQ8IZ52 775 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 WFDC5Q8TCV5 224 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 KCNV2Q8TDN2 545 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 SLC20A1Q8WUM9 679 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 HMGB4Q8WW32 186 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 RLN3Q8WXF3 142 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 TMA16Q96EY4 203 aaKnown RBP14.84□□□□□ -0.03
UBE3B-206ENST00000536398 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 CACNA2D2Q9NY47 1150 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 TLR6Q9Y2C9 796 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 SLC27A6Q9Y2P4 619 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 DCHS1Q96JQ0 3298 aa14.84□□□□□ -0.03
UBE3B-206ENST00000536398 DMXL1Q9Y485 3027 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 SYNJ2BP-COX16A0A087WUM0 186 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 LRRC10BA6NIK2 292 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 LGALS16A8MUM7 142 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 LATS1O95835 1130 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 TRUB2O95900 331 aaKnown RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 RETP07949 1114 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 TPM2P07951 284 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 MMEP08473 750 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 CDK11BP21127 795 aaKnown RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 BCKDHBP21953 392 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 SLC11A2P49281 568 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 JAM2P57087 298 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 UBXN1Q04323 297 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 EIF4EBP2Q13542 120 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 PLK5Q496M5 336 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 C2CD6Q53TS8 623 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 DCAF6Q58WW2 860 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 FKBP15Q5T1M5 1219 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 PIK3R6Q5UE93 754 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 OLFML1Q6UWY5 402 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 DHX40Q8IX18 779 aaKnown RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 PRICKLE1Q96MT3 831 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 SERPINB11Q96P15 392 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 NUCKS1Q9H1E3 243 aaKnown RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 DUSP15Q9H1R2 295 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 SLC6A17Q9H1V8 727 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 PDCL3Q9H2J4 239 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 CD248Q9HCU0 757 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 POLMQ9NP87 494 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-206ENST00000536398 COX16Q9P0S2 106 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 STIM2Q9P246 746 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 EML5Q05BV3 1969 aa14.83□□□□□ -0.04
UBE3B-206ENST00000536398 ZNF292O60281 2723 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 TBL1XO60907 577 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 HOXB2P14652 356 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 CHRNB2P17787 502 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 GABRG2P18507 467 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 HLA-FP30511 346 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 CDH5P33151 784 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-206ENST00000536398 RPS24P62847 133 aaKnown RBP14.82□□□□□ -0.04
UBE3B-206ENST00000536398 SLC6A3Q01959 620 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 SMYD5Q6GMV2 418 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 TRMT11Q7Z4G4 463 aaKnown RBP14.82□□□□□ -0.04
UBE3B-206ENST00000536398 ANKS1BQ7Z6G8 1248 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 CFAP52Q8N1V2 620 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 PGBD3Q8N328 593 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 TMEM35BQ8NCS4 154 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 OLIG1Q8TAK6 271 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 EPS8L1Q8TE68 723 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 IPO4Q8TEX9 1081 aaKnown RBP14.82□□□□□ -0.04
UBE3B-206ENST00000536398 CPA5Q8WXQ8 436 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 AZIN2Q96A70 460 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 PCMTD1Q96MG8 357 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-206ENST00000536398 NOX5Q96PH1 765 aa14.82□□□□□ -0.04
UBE3B-206ENST00000536398 GABRG3Q99928 467 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms