RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 MTX1Q13505 466 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 GRM4Q14833 912 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 NCAPHQ15003 741 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SF1Q15637 639 aaKnown RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 CDC37Q16543 378 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 KRTAP21-3Q3LHN1 58 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 BROXQ5VW32 411 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 PMS2CLQ68D20 193 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 Q6ZRM9 215 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 AACSQ86V21 672 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 TTC30AQ86WT1 665 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 ZNF227Q86WZ6 799 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 NAXDQ8IW45 347 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 MINDY1Q8N5J2 469 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 METTL13Q8N6R0 699 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 OR2I1PQ8NGU4 316 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 IL31RAQ8NI17 732 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SLC25A43Q8WUT9 341 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 SEPT1Q8WYJ6 367 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 LPPQ93052 612 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 EAF2Q96CJ1 260 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 C1orf159Q96HA4 380 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SCLT1Q96NL6 688 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 GAD1Q99259 594 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 MAF1Q9H063 256 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 TOR3AQ9H497 397 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 SYNPO2LQ9H987 977 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 PRDM16Q9HAZ2 1276 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 CHST12Q9NRB3 414 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.42□□□□□ -1.7
YBX3-205ENST00000536107 POLR3BQ9NW08 1133 aaPredicted RBP4.42□□□□□ -1.7
YBX3-205ENST00000536107 HCFC1R1Q9NWW0 138 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 MAN2B2Q9Y2E5 1009 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 ZBED9Q6R2W3 1325 aa4.42□□□□□ -1.7
YBX3-205ENST00000536107 DNHD1Q96M86 4753 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 A0A0U1RQF3 1178 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 B4E1Z4 1266 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SPECC1L-ADORA2AF8WAN1 911 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 NRP1O14786 923 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 RANBP6O60518 1105 aaKnown RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 AFPP02771 609 aaKnown RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 GOLGA8HP0CJ92 632 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 CEBPBP17676 345 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 KLRC1P26715 233 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 VIPR2P41587 438 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 OR1G1P47890 313 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 MAN2A2P49641 1150 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 CREMQ03060 361 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 TLE3Q04726 772 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SPIRE1Q08AE8 756 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 DBPQ10586 325 aaPredicted RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 FAM78AQ5JUQ0 283 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SLC35F1Q5T1Q4 408 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 OLFML1Q6UWY5 402 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 LPCAT2Q7L5N7 544 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 RALGPS2Q86X27 583 aaPredicted RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 KIAA0319LQ8IZA0 1049 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 TMEM145Q8NBT3 493 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SLC7A14Q8TBB6 771 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 DEPDC1BQ8WUY9 529 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SSH1Q8WYL5 1049 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 MIEF2Q96C03 454 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 B3GALT6Q96L58 329 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 SPATA32Q96LK8 384 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 LGMNQ99538 433 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 TPSD1Q9BZJ3 242 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 UBA5Q9GZZ9 404 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 CPVLQ9H3G5 476 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 ZNF768Q9H5H4 540 aaKnown RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 VAT1LQ9HCJ6 419 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 TRPV5Q9NQA5 729 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 TOMM22Q9NS69 142 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 DACT1Q9NYF0 836 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 CACNA1EQ15878 2313 aa4.41□□□□□ -1.7
YBX3-205ENST00000536107 ATXN2Q99700 1313 aaKnown RBP4.41□□□□□ -1.7
YBX3-205ENST00000536107 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 GSG1L2A8MUP6 293 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 E9PAM4 449 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 BCAR3O75815 825 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 C1RP00736 705 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 VTNP04004 478 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 RHOP08100 348 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TOP1P11387 765 aaKnown RBP4.4□□□□□ -1.71
YBX3-205ENST00000536107 BCKDHBP21953 392 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TNFRSF8P28908 595 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 DPP6P42658 865 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 TMPRSS3P57727 454 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 DSG1Q02413 1049 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 GRSF1Q12849 480 aaKnown RBP eCLIP4.4□□□□□ -1.71
YBX3-205ENST00000536107 SLC14A1Q13336 389 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 PTPAQ15257 358 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 UBE3CQ15386 1083 aa4.4□□□□□ -1.71
YBX3-205ENST00000536107 DUOXA1Q1HG43 343 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms