RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RRM1P23921 792 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 HOXC13P31276 330 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 SULT1E1P49888 294 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 GSCP56915 257 aaPredicted RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 KDSRQ06136 332 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 NME3Q13232 169 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 NNTQ13423 1086 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 ARID5BQ14865 1188 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 TDRD12Q587J7 1177 aaKnown RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 PKN3Q6P5Z2 889 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 BNIPLQ7Z465 357 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 NELL2Q99435 816 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 BBS2Q9BXC9 721 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 NUCKS1Q9H1E3 243 aaKnown RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 TMPRSS4Q9NRS4 437 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 PIGVQ9NUD9 493 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 POLR3BQ9NW08 1133 aaPredicted RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
DDX55-204ENST00000536079 MRPS17Q9Y2R5 130 aaKnown RBP18.59■□□□□ 0.57
DDX55-204ENST00000536079 A0A087X0T9 212 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 MFAP3LO75121 409 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 TULP3O75386 442 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.56
DDX55-204ENST00000536079 FTLP02792 175 aaPredicted RBP18.58■□□□□ 0.56
DDX55-204ENST00000536079 FAM228BP0C875 321 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 CHRM1P11229 460 aaPredicted RBP18.58■□□□□ 0.56
DDX55-204ENST00000536079 RFC1P35251 1148 aaPredicted RBP18.58■□□□□ 0.56
DDX55-204ENST00000536079 C15orf59Q2T9L4 293 aaPredicted RBP18.58■□□□□ 0.56
DDX55-204ENST00000536079 CCDC14Q49A88 953 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 PPP1R15BQ5SWA1 713 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 NUGGCQ68CJ6 796 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 CPXM2Q8N436 756 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 DTWD2Q8NBA8 298 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 RXFP2Q8WXD0 754 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 NENFQ9UMX5 172 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 ZNF318Q5VUA4 2279 aa18.58■□□□□ 0.56
DDX55-204ENST00000536079 C2CD4BA6NLJ0 364 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 K7EQS6 105 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 ADCY5O95622 1261 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 CALB1P05937 261 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 CISD3P0C7P0 127 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 EIF4A3P38919 411 aaKnown RBP18.57■□□□□ 0.56
DDX55-204ENST00000536079 RPL7AP62424 266 aaKnown RBP18.57■□□□□ 0.56
DDX55-204ENST00000536079 OGDHQ02218 1023 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 GRSF1Q12849 480 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDX55-204ENST00000536079 TRIM14Q14142 442 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 SLC25A52Q3SY17 297 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 ADGRF1Q5T601 910 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 ARCQ7LC44 396 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 UNC45BQ8IWX7 931 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 C3orf20Q8ND61 904 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 PRSS33Q8NF86 280 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 OR8K1Q8NGG5 319 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 PRICKLE1Q96MT3 831 aaPredicted RBP18.57■□□□□ 0.56
DDX55-204ENST00000536079 CHP1Q99653 195 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDX55-204ENST00000536079 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 HCN2Q9UL51 889 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 SNX10Q9Y5X0 201 aa18.57■□□□□ 0.56
DDX55-204ENST00000536079 SIGLEC16A6NMB1 481 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 CACNG3O60359 315 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 LATS1O95835 1130 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 KRT3P12035 628 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 GZMAP12544 262 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 CHKAP35790 457 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 GGCXP38435 758 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 RPS9P46781 194 aaKnown RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 CXCR3P49682 368 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 ATP11AP98196 1134 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 AMPD2Q01433 879 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 MTAPQ13126 283 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 ASTE1Q2TB18 679 aaPredicted RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 ARTNQ5T4W7 220 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 EMC10Q5UCC4 262 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 PIK3R6Q5UE93 754 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 RAP1GAP2Q684P5 730 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 C1orf228Q6PIY5 440 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 MAML2Q8IZL2 1156 aaPredicted RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 AZIN2Q96A70 460 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 PGAP3Q96FM1 320 aaPredicted RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 PNKPQ96T60 521 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 PRMT1Q99873 361 aaKnown RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 SELENOOQ9BVL4 669 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 ISCUQ9H1K1 167 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 CHRDQ9H2X0 955 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 ABHD10Q9NUJ1 306 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 DNAJC17Q9NVM6 304 aaKnown RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 FBXO10Q9UK96 956 aa18.56■□□□□ 0.56
DDX55-204ENST00000536079 BZW2Q9Y6E2 419 aaKnown RBP18.56■□□□□ 0.56
DDX55-204ENST00000536079 RTN2O75298 545 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 PDGFRAP16234 1089 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 HOXD9P28356 352 aaPredicted RBP18.55■□□□□ 0.56
DDX55-204ENST00000536079 GBP1P32455 592 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 SLC11A2P49281 568 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 SEC13P55735 322 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 DEUP1Q05D60 604 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 MAMLD1Q13495 774 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 PLEKHA7Q6IQ23 1121 aa18.55■□□□□ 0.56
DDX55-204ENST00000536079 DNAJC24Q6P3W2 148 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms