RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 A0A1W2PQF6 199 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 F8VZ95 297 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
ATL3-202ENST00000535789 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
ATL3-202ENST00000535789 NCAM1P13591 858 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 CHKAP35790 457 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 WASP42768 502 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 ACADSBP45954 432 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 EIF4EBP2Q13542 120 aaPredicted RBP17.07■□□□□ 0.32
ATL3-202ENST00000535789 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
ATL3-202ENST00000535789 TMEM215Q68D42 235 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 FAM183BPQ6ZVS7 135 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 FAM149B1Q96BN6 582 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 HINFPQ9BQA5 517 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 ADAM33Q9BZ11 813 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 XPO7Q9UIA9 1087 aaKnown RBP17.07■□□□□ 0.32
ATL3-202ENST00000535789 SLC27A6Q9Y2P4 619 aa17.07■□□□□ 0.32
ATL3-202ENST00000535789 NUMA1Q14980 2115 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 TSPAN3O60637 253 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 BCKDHBP21953 392 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 CDH5P33151 784 aaPredicted RBP17.06■□□□□ 0.32
ATL3-202ENST00000535789 COPB1P53618 953 aaKnown RBP17.06■□□□□ 0.32
ATL3-202ENST00000535789 JAM2P57087 298 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 MYL5Q02045 173 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 GSE1Q14687 1217 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
ATL3-202ENST00000535789 KIAA1211LQ6NV74 962 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 OLFML1Q6UWY5 402 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
ATL3-202ENST00000535789 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 FRMD1Q8N878 549 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 RNF214Q8ND24 703 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 ERLEC1Q96DZ1 483 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 LIMA1Q9UHB6 759 aaKnown RBP17.06■□□□□ 0.32
ATL3-202ENST00000535789 INVSQ9Y283 1065 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
ATL3-202ENST00000535789 GON4LQ3T8J9 2241 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 WASH3PC4AMC7 463 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 IRAK2O43187 625 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 LATS1O95835 1130 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 CYP11B1P15538 503 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 HARS2P49590 506 aaKnown RBP17.05■□□□□ 0.32
ATL3-202ENST00000535789 DGKEP52429 567 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 TBX4P57082 545 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 PTK2Q05397 1052 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 RING1Q06587 406 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 SPEM2Q0P670 501 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 PLK5Q496M5 336 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 BEND5Q7L4P6 421 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
ATL3-202ENST00000535789 CCDC26Q8TAB7 109 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 EPS8L1Q8TE68 723 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 PPP1R13BQ96KQ4 1090 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 SLC2A13Q96QE2 648 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 GABRG3Q99928 467 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 DUSP15Q9H1R2 295 aaPredicted RBP17.05■□□□□ 0.32
ATL3-202ENST00000535789 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 CACNA2D2Q9NY47 1150 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
ATL3-202ENST00000535789 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
ATL3-202ENST00000535789 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 TCRBV21S2A2A0A5A6 115 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 SART1O43290 800 aaKnown RBP17.04■□□□□ 0.32
ATL3-202ENST00000535789 ACSL4O60488 711 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 GRAP2O75791 330 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 HOXB2P14652 356 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 GABRG2P18507 467 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 HLA-FP30511 346 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 NNTQ13423 1086 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 EOGTQ5NDL2 527 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 ADGRF1Q5T601 910 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 TAF3Q5VWG9 929 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 CEP68Q76N32 757 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 DDI1Q8WTU0 396 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 SLC20A1Q8WUM9 679 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 SORCS1Q8WY21 1168 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 ZC3H10Q96K80 434 aaKnown RBP17.04■□□□□ 0.32
ATL3-202ENST00000535789 SERPINB11Q96P15 392 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
ATL3-202ENST00000535789 SLC6A17Q9H1V8 727 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 POPDC2Q9HBU9 364 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
ATL3-202ENST00000535789 GMEB2Q9UKD1 530 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 TLR6Q9Y2C9 796 aa17.04■□□□□ 0.32
ATL3-202ENST00000535789 LGALS16A8MUM7 142 aa17.03■□□□□ 0.32
ATL3-202ENST00000535789 EPN2O95208 641 aa17.03■□□□□ 0.32
ATL3-202ENST00000535789 TRUB2O95900 331 aaKnown RBP17.03■□□□□ 0.32
ATL3-202ENST00000535789 RETP07949 1114 aa17.03■□□□□ 0.32
ATL3-202ENST00000535789 NTSR1P30989 418 aa17.03■□□□□ 0.32
ATL3-202ENST00000535789 IL12RB1P42701 662 aa17.03■□□□□ 0.32
ATL3-202ENST00000535789 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms