RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SDC4P31431 198 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 CCR1P32246 355 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 GJA4P35212 333 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ZNF143P52747 638 aaPredicted RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 VCPP55072 806 aaKnown RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 OGDHQ02218 1023 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 PRKCQQ04759 706 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 NR1H3Q13133 447 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ADGRF1Q5T601 910 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 NADSYN1Q6IA69 706 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 TMTC1Q8IUR5 882 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 RNF34Q969K3 372 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ARHGEF26Q96DR7 871 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 P2RY11Q96G91 374 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 TRIM7Q9C029 511 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 C8orf33Q9H7E9 229 aaPredicted RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 SCINQ9Y6U3 715 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 SOWAHDA6NJG2 315 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 GFRA2O00451 464 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 CCP110O43303 1012 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 ADH1CP00326 375 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 SLC2A3P11169 496 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 ADH5P11766 374 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 CD72P21854 359 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 SLC6A4P31645 630 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 CTHP32929 405 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 CHKAP35790 457 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 SLC11A2P49281 568 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 MRE11P49959 708 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 STARD6P59095 220 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 ZNF252P-AS1Q0IIN9 211 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 CDO1Q16878 200 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 TXNDC11Q6PKC3 985 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 TPGS1Q6ZTW0 290 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 SND1Q7KZF4 910 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHD4-203ENST00000535717 RALGPS2Q86X27 583 aaPredicted RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 TMEM139Q8IV31 216 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 CPXM2Q8N436 756 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 FAM172AQ8WUF8 416 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 SHDQ96IW2 340 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 BTN2A3PQ96KV6 586 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 BAG1Q99933 345 aaPredicted RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 WDCPQ9H6R7 721 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
CHD4-203ENST00000535717 ANLNQ9NQW6 1124 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CHD4-203ENST00000535717 I6L893 689 aaPredicted RBP12.51□□□□□ -0.41
CHD4-203ENST00000535717 HOXC11O43248 304 aaPredicted RBP12.51□□□□□ -0.41
CHD4-203ENST00000535717 TSPAN3O60637 253 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 LCA5LO95447 670 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 TMEM253P0C7T8 217 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 HDAC4P56524 1084 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 GSDMDP57764 484 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 GAD2Q05329 585 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 ANO4Q32M45 955 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 BRMS1LQ5PSV4 323 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 RAD9BQ6WBX8 426 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 ZNF852Q6ZMS4 543 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 STRADAQ7RTN6 431 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 C12orf40Q86WS4 652 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 ATP6V0D2Q8N8Y2 350 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 CTNNBL1Q8WYA6 563 aaPredicted RBP12.51□□□□□ -0.41
CHD4-203ENST00000535717 FAM3CQ92520 227 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 BHMTQ93088 406 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 MYEOVQ96EZ4 313 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 MSANTD3Q96H12 275 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 NUP85Q9BW27 656 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 TKTL2Q9H0I9 626 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 TBC1D17Q9HA65 648 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 C11orf16Q9NQ32 467 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 TMPRSS4Q9NRS4 437 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 SLC12A6Q9UHW9 1150 aa12.51□□□□□ -0.41
CHD4-203ENST00000535717 EPN1Q9Y6I3 576 aaPredicted RBP12.51□□□□□ -0.41
CHD4-203ENST00000535717 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
CHD4-203ENST00000535717 FAM86C2PA6NEL3 165 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms