RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MAD2L1Q13257 205 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 PPIL2Q13356 520 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 FNDC3BQ53EP0 1204 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 RINLQ6ZS11 566 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 ATG16L2Q8NAA4 619 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 IGFLR1Q9H665 355 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 CNPP09543 421 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 NUP107P57740 925 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 C16orf62Q7Z3J2 963 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 A0A0A6YYK5 440 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 FAM220BPB1ANY3 271 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 UBDO15205 165 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 MAPTP10636 758 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 VAC14Q08AM6 782 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 GPR141Q7Z602 305 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 LGI2Q8N0V4 545 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 CDC42EP4Q9H3Q1 356 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 KATNA1O75449 491 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 DDNO94850 711 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 RPN2P04844 631 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ABCB1P08183 1280 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ACADSP16219 412 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 NUP62P37198 522 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 RCN1Q15293 331 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 KDM7AQ6ZMT4 941 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 SCUBE1Q8IWY4 988 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 KBTBD4Q9NVX7 518 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 AP4S1Q9Y587 144 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 CNOT3O75175 753 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 AKAP3O75969 853 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 MTA2O94776 668 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 PDPK2PQ6A1A2 396 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 MRPS26Q9BYN8 205 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 KIAA1683Q9H0B3 1180 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 SLC24A2Q9UI40 661 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 BMPR2Q13873 1038 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 CCDC103Q8IW40 242 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ACTRT1Q8TDG2 376 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 MAP10Q9P2G4 905 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 DLGAP3O95886 979 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ADORA2AP29274 412 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 FEN1P39748 380 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ENGASEQ8NFI3 743 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 APBB2Q92870 758 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 GLMNQ92990 594 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 UNKQ9C0B0 810 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ELOVL4Q9GZR5 314 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 ABHD16BQ9H3Z7 469 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 HAO1Q9UJM8 370 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 TPH1P17752 444 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 SKIV2L2P42285 1042 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 PSEN2P49810 448 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 TBCBQ99426 244 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 SLC40A1Q9NP59 571 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 OSGEPQ9NPF4 335 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 TAGLN3Q9UI15 199 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 TRPV2Q9Y5S1 764 aa18.6■□□□□ 0.57
SFSWAP-203ENST00000535236 HOXC6P09630 235 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ALDH5A1P51649 535 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 AGKQ53H12 422 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 REPS1Q96D71 796 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 PHACTR1Q9C0D0 580 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 COMMD8Q9NX08 183 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 PSMC3P17980 439 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ILF2Q12905 390 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 DOK6Q6PKX4 331 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 HDDC2Q7Z4H3 204 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ZNF410Q86VK4 478 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 MCOLN3Q8TDD5 553 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 TATDN2Q93075 761 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 TMEM120AQ9BXJ8 343 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 CEP41Q9BYV8 373 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 AKAP7Q9P0M2 348 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 MICAL2O94851 1124 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 BGNP21810 368 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 MRPS35P82673 323 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ZNF268Q14587 947 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ZNF571Q7Z3V5 609 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 GLT6D1Q7Z4J2 308 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 LZTR1Q8N653 840 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ACTL9Q8TC94 416 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ASB7Q9H672 318 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 NOS3P29474 1203 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 SARSP49591 514 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 BCL2L1Q07817 233 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 ITIH4Q14624 930 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 SLC39A12Q504Y0 691 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 FIGNQ5HY92 759 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 GRTP1Q5TC63 336 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 FBXO39Q8N4B4 442 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 C1QTNF7Q9BXJ2 289 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 DLGAP2Q9P1A6 1054 aa18.59■□□□□ 0.57
SFSWAP-203ENST00000535236 TM9SF1O15321 606 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 FCGR1AP12314 374 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms