RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 INAVAQ3KP66 663 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 PKDCCQ504Y2 493 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 ACOT1Q86TX2 421 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 BOD1L1Q8NFC6 3051 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
SVIP-205ENST00000533774 ARID3AQ99856 593 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 CIPCQ9C0C6 399 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 TMEM245Q9H330 911 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 CSNK1G1Q9HCP0 422 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
SVIP-205ENST00000533774 HSPBP1Q9NZL4 362 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 AHCTF1Q8WYP5 2266 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 BSNQ9UPA5 3926 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 ITGAVP06756 1048 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 DLATP10515 647 aaKnown RBP12.91□□□□□ -0.34
SVIP-205ENST00000533774 RARGP13631 454 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 GLDCP23378 1020 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
SVIP-205ENST00000533774 DSG2Q14126 1118 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 SURF1Q15526 300 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 SERPINA13PQ6UXR4 307 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 KANSL1Q7Z3B3 1105 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
SVIP-205ENST00000533774 SCD5Q86SK9 330 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 ZC3H3Q8IXZ2 948 aaKnown RBP12.91□□□□□ -0.34
SVIP-205ENST00000533774 RDH13Q8NBN7 331 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 CYB5D2Q8WUJ1 264 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 HIC2Q96JB3 615 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
SVIP-205ENST00000533774 LGMNQ99538 433 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 PCDHB1Q9Y5F3 818 aa12.91□□□□□ -0.34
SVIP-205ENST00000533774 A0A1W2PR77 199 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 C10orf142B7Z368 130 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 SLC28A2O43868 658 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 DFNA5O60443 496 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
SVIP-205ENST00000533774 HMBSP08397 361 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 CDK4P11802 303 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 IDEP14735 1019 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 TNNI1P19237 187 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 ABCB4P21439 1286 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 BCAT1P54687 386 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 C21orf59P57076 290 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 RACK1P63244 317 aaKnown RBP12.9□□□□□ -0.34
SVIP-205ENST00000533774 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 KCNJ12Q14500 433 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 C10orf120Q5SQS8 335 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 DCBLD1Q8N8Z6 715 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 C12orf29Q8N999 325 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 ACE2Q9BYF1 805 aaPredicted RBP12.9□□□□□ -0.34
SVIP-205ENST00000533774 MTG2Q9H4K7 406 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 PRSS16Q9NQE7 514 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 SERGEFQ9UGK8 458 aa12.9□□□□□ -0.34
SVIP-205ENST00000533774 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
SVIP-205ENST00000533774 FLNCQ14315 2725 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 A0A1W2PPC4 97 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 EPHA8P29322 1005 aaPredicted RBP12.89□□□□□ -0.35
SVIP-205ENST00000533774 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
SVIP-205ENST00000533774 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 PSMD6Q15008 389 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
SVIP-205ENST00000533774 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
SVIP-205ENST00000533774 SFMBT2Q5VUG0 894 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 KIAA0895LQ68EN5 471 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 KDM7AQ6ZMT4 941 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 CACTIN-AS1Q8N1I8 211 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 ZNF248Q8NDW4 579 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
SVIP-205ENST00000533774 FAM49BQ9NUQ9 324 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 STK17AQ9UEE5 414 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 CLCA2Q9UQC9 943 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 TEX15Q9BXT5 2789 aa12.89□□□□□ -0.35
SVIP-205ENST00000533774 A0A087X0B3 334 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
SVIP-205ENST00000533774 TGFB1I1O43294 461 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 HLA-FP30511 346 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 CASP4P49662 377 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 GALCP54803 685 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 TMPRSS3P57727 454 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 ALCAMQ13740 583 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms