RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TRPV2Q9Y5S1 764 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CLUHO75153 1309 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SPTA1P02549 2419 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 SMIM23A6NLE4 172 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 PPEF2O14830 753 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 DAB1O75553 588 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 GABBR2O75899 941 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 FBXO21O94952 628 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 IFNB1P01574 187 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 GSTA1P08263 222 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 CD48P09326 243 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 ZSCAN5DPP0CG00 497 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 ETS1P14921 441 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 BRAFP15056 766 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 IL4RP24394 825 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 RPL9P32969 192 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 LHX1P48742 406 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 HDAC4P56524 1084 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 GEMIN4P57678 1058 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 LILRA4P59901 499 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 SLC20A2Q08357 652 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 PDIA2Q13087 525 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 HIC1Q14526 733 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 CCDC38Q502W7 563 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 UBAP2Q5T6F2 1119 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 DARS2Q6PI48 645 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 ADGRD1Q6QNK2 874 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 BNIPLQ7Z465 357 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 UNC45BQ8IWX7 931 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 CCDC13Q8IYE1 715 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 PQLC3Q8N755 202 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 C7orf31Q8N865 590 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 UHMK1Q8TAS1 419 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 PYROXD1Q8WU10 500 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 TMEM40Q8WWA1 233 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 NT5C3BQ969T7 300 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 ACSF2Q96CM8 615 aaPredicted RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 CABS1Q96KC9 395 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 SLC9A7Q96T83 725 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 FAM118BQ9BPY3 351 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 SNRNP25Q9BV90 132 aaKnown RBP10.02□□□□□ -0.81
CHKA-207ENST00000533728 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 USP29Q9HBJ7 922 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 NKIRAS1Q9NYS0 192 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 RRN3Q9NYV6 651 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.02□□□□□ -0.81
CHKA-207ENST00000533728 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 RAD54BQ9Y620 910 aa10.02□□□□□ -0.81
CHKA-207ENST00000533728 TET1Q8NFU7 2136 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 IGSF10Q6WRI0 2623 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 A0A1W2PQ45 241 aaPredicted RBP10.01□□□□□ -0.81
CHKA-207ENST00000533728 A0A1W2PQY0 241 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 MYADML2A6NDP7 307 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 ZBBXA8MT70 800 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 C9IYK1 514 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 RASA4BC9J798 803 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 RASA4O43374 803 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 ZNF623O75123 536 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 GCATO75600 419 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 PGK1P00558 417 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 FGFR1P11362 822 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 TPSB2P20231 275 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 GCAP28676 217 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 L1CAMP32004 1257 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 NOS2P35228 1153 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 MATKP42679 507 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 RGS7P49802 495 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 CDK7P50613 346 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 RAB27AP51159 221 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 ACLYP53396 1101 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 GDF10P55107 478 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 BCAR1P56945 870 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 DYNLT1P63172 113 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 CDK16Q00536 496 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 TMEM62Q0P6H9 643 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 TAF5Q15542 800 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 TPSAB1Q15661 275 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 SKIDA1Q1XH10 827 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
CHKA-207ENST00000533728 SLC25A52Q3SY17 297 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 FAM43BQ6ZT52 329 aaPredicted RBP10.01□□□□□ -0.81
CHKA-207ENST00000533728 CCDC121Q6ZUS5 278 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 FAM228AQ86W67 206 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 ZBED8Q8IZ13 594 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 SCML4Q8N228 414 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 B3GALNT2Q8NCR0 500 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 GDPD5Q8WTR4 605 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 DYDC1Q8WWB3 177 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 LENG1Q96BZ8 264 aaPredicted RBP10.01□□□□□ -0.81
CHKA-207ENST00000533728 PRMT1Q99873 361 aaKnown RBP10.01□□□□□ -0.81
CHKA-207ENST00000533728 KLC2Q9H0B6 622 aa10.01□□□□□ -0.81
CHKA-207ENST00000533728 NRDE2Q9H7Z3 1164 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms