RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TMA16Q96EY4 203 aaKnown RBP10.88□□□□□ -0.67
CAPN1-225ENST00000533704 FAM81BQ96LP2 452 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 ANP32EQ9BTT0 268 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 THAP9Q9H5L6 903 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 RXFP3Q9NSD7 469 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 STIM2Q9P246 746 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 CYP8B1Q9UNU6 501 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 SLC27A6Q9Y2P4 619 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 STON1Q9Y6Q2 735 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 ATXN2Q99700 1313 aaKnown RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 NUMA1Q14980 2115 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 GOLGA6L7A0A1B0GV03 622 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 BECN2A8MW95 431 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 E5RJQ4 531 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 CAPN9O14815 690 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 SART1O43290 800 aaKnown RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 MOCS2O96007 188 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 PNMA6AP0CW24 399 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 NDUFV2P19404 249 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 HOXD9P28356 352 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 ACADSBP45954 432 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 SLC11A2P49281 568 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 RPL6Q02878 288 aaKnown RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 MAP7D1Q3KQU3 841 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 PLA2G2CQ5R387 149 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 ADGRF1Q5T601 910 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 NUGGCQ68CJ6 796 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 RNF43Q68DV7 783 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 RFWD3Q6PCD5 774 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 CACUL1Q86Y37 369 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 UNC45BQ8IWX7 931 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 FAM217AQ8IXS0 508 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 DQX1Q8TE96 717 aaKnown RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 PIWIL1Q96J94 861 aaKnown RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 GABRG3Q99928 467 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 LMBRD1Q9NUN5 540 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 ELOVL2Q9NXB9 296 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 MBD1Q9UIS9 605 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 FBXO10Q9UK96 956 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 DNAJC12Q9UKB3 198 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 AJAP1Q9UKB5 411 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-225ENST00000533704 NAALADL1Q9UQQ1 740 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
CAPN1-225ENST00000533704 ASCC3Q8N3C0 2202 aaKnown RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SYNJ2BP-COX16A0A087WUM0 186 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 FAM170AA1A519 330 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 KCNJ18B7U540 433 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 KHNYNO15037 678 aaKnown RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 PAPSS1O43252 624 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 ACSL4O60488 711 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SYNCRIPO60506 623 aaKnown RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 TBL1XO60907 577 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 IL12RB1P42701 662 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 PTGER3P43115 390 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SGSHP51688 502 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 PDCLQ13371 301 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 RAPGEF1Q13905 1077 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 KCNJ12Q14500 433 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 ZNF234Q14588 700 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 FNDC3BQ53EP0 1204 aaKnown RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 STPG1Q5TH74 334 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 LYSMD4Q5XG99 296 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 TAC4Q86UU9 113 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SHC3Q92529 594 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SERPINB11Q96P15 392 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 GBP4Q96PP9 640 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 EDEM2Q9BV94 578 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SLC2A11Q9BYW1 496 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 NDST4Q9H3R1 872 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SIX2Q9NPC8 291 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 SAMSN1Q9NSI8 373 aaKnown RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 ABCB8Q9NUT2 735 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 COX16Q9P0S2 106 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 THAP10Q9P2Z0 257 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-225ENST00000533704 TJP2Q9UDY2 1190 aa10.86□□□□□ -0.67
CAPN1-225ENST00000533704 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
CAPN1-225ENST00000533704 GTPBP10A4D1E9 387 aaKnown RBP10.85□□□□□ -0.67
CAPN1-225ENST00000533704 GFRA2O00451 464 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 AP5Z1O43299 807 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 NDUFS2O75306 463 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 LATS1O95835 1130 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 IGLV3-27P01718 113 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 APOEP02649 317 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 FYNP06241 537 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 EPHX1P07099 455 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 HLA-EP13747 358 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 PRKCHP24723 683 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 HLA-FP30511 346 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 SLC6A4P31645 630 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 KRT9P35527 623 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 ZNF445P59923 1031 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 PTK2Q05397 1052 aa10.85□□□□□ -0.67
CAPN1-225ENST00000533704 EIF4HQ15056 248 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms