RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 DENND5BQ6ZUT9 1274 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 VSIG1Q86XK7 387 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 ATP11CQ8NB49 1132 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 CCNYQ8ND76 341 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 CFAP36Q96G28 342 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 KLF6Q99612 283 aaPredicted RBP12.34□□□□□ -0.43
CLP1-205ENST00000533682 CSNK1G1Q9HCP0 422 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 RGS18Q9NS28 235 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 CDH23Q9H251 3354 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 PTPRDP23468 1912 aa12.34□□□□□ -0.43
CLP1-205ENST00000533682 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.33□□□□□ -0.43
CLP1-205ENST00000533682 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 GOLGA8RI6L899 631 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 CHADO15335 359 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 DGKIO75912 1065 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 FAM155BO75949 473 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 CYP11A1P05108 521 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 GATMP50440 423 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.43
CLP1-205ENST00000533682 OLIG2Q13516 323 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 EFHC2Q5JST6 749 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 HEATR6Q6AI08 1181 aaKnown RBP12.33□□□□□ -0.43
CLP1-205ENST00000533682 METTL23Q86XA0 190 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 DEPDC1BQ8WUY9 529 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 SGSM3Q96HU1 749 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 CABS1Q96KC9 395 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 PGLYRP2Q96PD5 576 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 PAFAH2Q99487 392 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 PAIP2Q9BPZ3 127 aaKnown RBP12.33□□□□□ -0.43
CLP1-205ENST00000533682 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 SEPT10Q9P0V9 454 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 PTCH2Q9Y6C5 1203 aa12.33□□□□□ -0.43
CLP1-205ENST00000533682 TCP11X1B4DZS4 312 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 KCNK1O00180 336 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 ATP5DP30049 168 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 OR1G1P47890 313 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 NR2C2P49116 596 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 WDR4P57081 412 aaKnown RBP12.33□□□□□ -0.44
CLP1-205ENST00000533682 GEMIN4P57678 1058 aaKnown RBP12.33□□□□□ -0.44
CLP1-205ENST00000533682 CRADDP78560 199 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 KBTBD12Q3ZCT8 623 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 ZNF534Q76KX8 674 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 TFB1MQ8WVM0 346 aaKnown RBP12.33□□□□□ -0.44
CLP1-205ENST00000533682 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 QKIQ96PU8 341 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLP1-205ENST00000533682 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 PRDM12Q9H4Q4 367 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
CLP1-205ENST00000533682 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 ZNF487B1APH4 448 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 EEF2KO00418 725 aaKnown RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 GCATO75600 419 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 FBXO21O94952 628 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ZFXP17010 805 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 ERCC2P18074 760 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 DPYSQ14117 519 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 GPNMBQ14956 572 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ANKRD20A3Q5VUR7 823 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 DCLRE1AQ6PJP8 1040 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 GLB1LQ6UWU2 654 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 SLC24A5Q71RS6 500 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 CDKL3Q8IVW4 592 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 NPWQ8N729 165 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 SUSD3Q96L08 255 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ELAC2Q9BQ52 826 aaKnown RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 KLC2Q9H0B6 622 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 TKTL2Q9H0I9 626 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ACSS3Q9H6R3 686 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 GRID1Q9ULK0 1009 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 FRMPD3Q5JV73 1810 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 CFAP69A5D8W1 941 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 CABYRO75952 493 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 TOMM70O94826 608 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 KRT4P19013 534 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ELF1P32519 619 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 GPR15P49685 360 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 YWHAHQ04917 246 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 XRCC4Q13426 336 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 ZKSCAN8Q15776 578 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 SMAD1Q15797 465 aaKnown RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 SPRED3Q2MJR0 410 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 TAC4Q86UU9 113 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms