RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	CCDC172	P0C7W6	258 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CEACAM1	P13688	526 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CCDC130	P13994	396 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	KRT9	P35527	623 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ADK	P55263	362 aa	Known RBP	11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	BPIFB4	P59827	614 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ZBED6	P86452	979 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	GOLGA8F	Q08AF8	430 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	GOLGA8DP	Q0D2H9	430 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TRIM14	Q14142	442 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ASIC2	Q16515	512 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TRIM61	Q5EBN2	209 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SPDYC	Q5MJ68	293 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SFMBT2	Q5VUG0	894 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SLC23A3	Q6PIS1	610 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	HTR3D	Q70Z44	454 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SYT12	Q8IV01	421 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FAM71A	Q8IYT1	594 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	UBR7	Q8N806	425 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	C12orf29	Q8N999	325 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SLC4A11	Q8NBS3	891 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SLC2A14	Q8TDB8	520 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	HMGB4	Q8WW32	186 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CYFIP2	Q96F07	1278 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	P2RY11	Q96G91	374 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	PDCL3	Q9H2J4	239 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ACP6	Q9NPH0	428 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	OSER1	Q9NX31	292 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	DEC1	Q9P2X7	70 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	PILRB	Q9UKJ0	227 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	KIAA1257	Q9ULG3	409 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SH3BP1	Q9Y3L3	701 aa		11.22	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FREM2	Q5SZK8	3169 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ATP8B3	O60423	1300 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259		A0A1W2PQJ5	194 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TCRBV21S2A2	A0A5A6	115 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	LRRC53	A6NM62	1247 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	C1QTNF9B	B2RNN3	333 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	MAP3K13	O43283	966 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	THAP12	O43422	761 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TLR5	O60602	858 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	GYPC	P04921	128 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	PAEP	P09466	180 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CISD3	P0C7P0	127 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	C1QTNF9	P0C862	333 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	VDR	P11473	427 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FER	P16591	822 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	GABRG2	P18507	467 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SPINK2	P20155	84 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ITPKA	P23677	461 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CDC25B	P30305	580 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CLCN1	P35523	988 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	MAP3K7CL	P57077	242 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	JAM2	P57087	298 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ZNF252P-AS1	Q0IIN9	211 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ANO4	Q32M45	955 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SGO2	Q562F6	1265 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	BTBD8	Q5XKL5	378 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ARMCX6	Q7L4S7	300 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	GPRIN1	Q7Z2K8	1008 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SLC47A2	Q86VL8	602 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TERB1	Q8NA31	727 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	BAP1	Q92560	729 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ACOX2	Q99424	681 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	HNRNPAB	Q99729	332 aa	Known RBP	11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	TTYH3	Q9C0H2	523 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	NUCKS1	Q9H1E3	243 aa	Known RBP	11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FBXO44	Q9H4M3	255 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CYLD	Q9NQC7	956 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	KRT82	Q9NSB4	513 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	FAM49B	Q9NUQ9	324 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	CNTN6	Q9UQ52	1028 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	SCML2	Q9UQR0	700 aa		11.21	□□□□□ -0.61
PDE4DIP-231	ENST00000533259	NBEA	Q8NFP9	2946 aa		11.21	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	PRRT4	C9JH25	899 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	MED7	O43513	233 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	IRF1	P10914	325 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	SKIL	P12757	684 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	BRD2	P25440	801 aa	Known RBP	11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	ADORA2B	P29275	332 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	GNA15	P30679	374 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	NTSR1	P30989	418 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	WAS	P42768	502 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	LMAN2	Q12907	356 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	TBX2	Q13207	712 aa	Predicted RBP	11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	BYSL	Q13895	437 aa	Known RBP	11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	UAP1L1	Q3KQV9	507 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	C10orf76	Q5T2E6	689 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	TAF3	Q5VWG9	929 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	EGFLAM	Q63HQ2	1017 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	KIAA1211L	Q6NV74	962 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	CLEC20A	Q6ZU45	233 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	PIP4P1	Q86T03	277 aa		11.2	□□□□□ -0.62
PDE4DIP-231	ENST00000533259	CNGA4	Q8IV77	575 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms