RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RLN3Q8WXF3 142 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 AZIN2Q96A70 460 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 SERPINB11Q96P15 392 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 NOX5Q96PH1 765 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 GABRG3Q99928 467 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 DDX50Q9BQ39 737 aaKnown RBP17.94■□□□□ 0.46
PHRF1-204ENST00000532550 CACNA2D2Q9NY47 1150 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 CLEC4EQ9ULY5 219 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 PCDHGC3Q9UN70 934 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 NFE2L3Q9Y4A8 694 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 GON4LQ3T8J9 2241 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-204ENST00000532550 A0A1W2PQF6 199 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 WASH3PC4AMC7 463 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 NPC1O15118 1278 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 PAPSS1O43252 624 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-204ENST00000532550 ACSL4O60488 711 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 IGLV3-27P01718 113 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 CLCN1P35523 988 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 MPLP40238 635 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 P2RY2P41231 377 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 ARID5AQ03989 594 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 KCNMA1Q12791 1236 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 PDCLQ13371 301 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 PMS2CLQ68D20 193 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 DQX1Q8TE96 717 aaKnown RBP17.93■□□□□ 0.46
PHRF1-204ENST00000532550 IPO4Q8TEX9 1081 aaKnown RBP17.93■□□□□ 0.46
PHRF1-204ENST00000532550 PPP1R13BQ96KQ4 1090 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 IRX2Q9BZI1 471 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-204ENST00000532550 LHX5Q9H2C1 402 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 POPDC2Q9HBU9 364 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 VPS45Q9NRW7 570 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 ELOVL2Q9NXB9 296 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 TLR6Q9Y2C9 796 aa17.93■□□□□ 0.46
PHRF1-204ENST00000532550 GOLGA6L7A0A1B0GV03 622 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 IRAK2O43187 625 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 TPM2P07951 284 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 GABRG2P18507 467 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 BCKDHBP21953 392 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 HOXD9P28356 352 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 DHPSP49366 369 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 ATXN1P54253 815 aaKnown RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 RAPGEF1Q13905 1077 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 STARD3Q14849 445 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 EIF4HQ15056 248 aaKnown RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 AASDHQ4L235 1098 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 PLA2G2CQ5R387 149 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 KLHDC7AQ5VTJ3 777 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 SYPL2Q5VXT5 272 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 RBM43Q6ZSC3 357 aaKnown RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 LPCAT2Q7L5N7 544 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 SLC47A2Q86VL8 602 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 PASD1Q8IV76 773 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 WDTC1Q8N5D0 677 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 ADAM32Q8TC27 787 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 NETO1Q8TDF5 533 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 ERLEC1Q96DZ1 483 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 RTKNQ9BST9 563 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 CIPCQ9C0C6 399 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 PDCL3Q9H2J4 239 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 THAP10Q9P2Z0 257 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 AJAP1Q9UKB5 411 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-204ENST00000532550 CEP83Q9Y592 693 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 STON1Q9Y6Q2 735 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 DCHS1Q96JQ0 3298 aa17.92■□□□□ 0.46
PHRF1-204ENST00000532550 BCLAF3A2AJT9 711 aaKnown RBP17.91■□□□□ 0.46
PHRF1-204ENST00000532550 TBL1XO60907 577 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 CAVIN2O95810 425 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 NNTQ13423 1086 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 DRAP1Q14919 205 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-204ENST00000532550 SF3A2Q15428 464 aaKnown RBP17.91■□□□□ 0.46
PHRF1-204ENST00000532550 MAP7D1Q3KQU3 841 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 EFHC1Q5JVL4 640 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 MPP7Q5T2T1 576 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 PIK3R6Q5UE93 754 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 KIAA1211LQ6NV74 962 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 RFWD3Q6PCD5 774 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 FAM71AQ8IYT1 594 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 FCRL2Q96LA5 508 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-204ENST00000532550 CPXM1Q96SM3 734 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 SYNCQ9H7C4 482 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 ANO10Q9NW15 660 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 TAB2Q9NYJ8 693 aa17.91■□□□□ 0.46
PHRF1-204ENST00000532550 NUP205Q92621 2012 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 TYW5A2RUC4 315 aaKnown RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 GDF9O60383 454 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SYNCRIPO60506 623 aaKnown RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 ZNF217O75362 1048 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 TRUB2O95900 331 aaKnown RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 MBD3O95983 291 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 GLI1P08151 1106 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 PNMA6AP0CW24 399 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 DCAF6Q58WW2 860 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SPDYCQ5MJ68 293 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 OR6B2Q6IFH4 312 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SLC36A4Q6YBV0 504 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms