RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 NR6A1Q15406 480 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SULT1C3Q6IMI6 304 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 HIST3H2AQ7L7L0 130 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 TMEM132CQ8N3T6 1108 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PCDH19Q8TAB3 1148 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SPATA18Q8TC71 538 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 TNFAIP8L1Q8WVP5 186 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 STARD8Q92502 1023 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PIK3R3Q92569 461 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 HIST1H2ACQ93077 130 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 ART5Q96L15 291 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 CCNB1IP1Q9NPC3 277 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PCDH12Q9NPG4 1184 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 RAD51CO43502 376 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 RECQL5O94762 991 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 NUDT14O95848 222 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 CLUP10909 449 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 TNNI3P19429 210 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 TGM2P21980 687 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 KCNJ6P48051 423 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PKN1Q16512 942 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 FRMD7Q6ZUT3 714 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SPATA2LQ8IUW3 424 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 ACOT12Q8WYK0 555 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 WDR24Q96S15 920 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 ADGRL1O94910 1474 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 UNC13AQ9UPW8 1703 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 IDH2P48735 452 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PPP2R2BQ00005 443 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 KCNMA1Q12791 1236 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 COASYQ13057 564 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SLC18A3Q16572 532 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 FAM76BQ5HYJ3 339 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 OGFRL1Q5TC84 451 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 BPIFB6Q8NFQ5 453 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 HNRNPLLQ8WVV9 542 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MAP4K1Q92918 833 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CIDECQ96AQ7 238 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PIF1Q9H611 641 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CCDC86Q9H6F5 360 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 POLD4Q9HCU8 107 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TRPV5Q9NQA5 729 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 NKIRAS2Q9NYR9 191 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 GGA3Q9NZ52 723 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 GNPTGQ9UJJ9 305 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SHOC2Q9UQ13 582 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SAGE2PA6NJ88 616 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 AKAP8O43823 692 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TSPAN1O60635 241 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MAFKO60675 156 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ASNSP08243 561 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PCNAP12004 261 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 IL13P35225 146 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 NT5C2P49902 561 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PRELPP51888 382 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 GEMP55040 296 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CACNB2Q08289 660 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TCHHL1Q5QJ38 904 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 GRHL2Q6ISB3 625 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PM20D2Q8IYS1 436 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RAD54LQ92698 747 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 BHMTQ93088 406 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 COA7Q96BR5 231 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MS4A14Q96JA4 679 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 METTL8Q9H825 291 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TCF7L2Q9NQB0 619 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 OGDHLQ9ULD0 1010 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RBMX2Q9Y388 322 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 H7C2Y5 167 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 KIAA0391O15091 583 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF185O15231 689 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MAGEB3O15480 346 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 OR5F1O95221 314 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 HSD17B3P37058 310 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PRCPP42785 496 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ENPEPQ07075 957 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MIIPQ5JXC2 388 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 FRMD5Q7Z6J6 570 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MAFIPQ8WZ33 124 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MAGEB10Q96LZ2 347 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 NAT9Q9BTE0 207 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TDRD1Q9BXT4 1180 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ALG5Q9Y673 324 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 UTYO14607 1347 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SLC16A4O15374 487 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 KDM4BO94953 1096 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms