RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 POLR3BQ9NW08 1133 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-220ENST00000532375 SPATA6Q9NWH7 488 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-220ENST00000532375 TAS2R14Q9NYV8 317 aa14.5□□□□□ -0.09
TSPAN4-220ENST00000532375 PLK2Q9NYY3 685 aa14.5□□□□□ -0.09
TSPAN4-220ENST00000532375 NEDD8-MDP1E9PL57 170 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 K7ESF4 209 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 RNF40O75150 1001 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PAPSS2O95340 614 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SP9P0CG40 484 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SKILP12757 684 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 GRIA2P42262 883 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 KIR2DL1P43626 348 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SGSHP51688 502 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PTPN5P54829 565 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 CDK17Q00537 523 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SATB1Q01826 763 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 FBXO43Q4G163 708 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PIK3R6Q5UE93 754 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SFMBT2Q5VUG0 894 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 MON1BQ7L1V2 547 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PHLDB2Q86SQ0 1253 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 UNC45BQ8IWX7 931 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 USP33Q8TEY7 942 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 SYN2Q92777 582 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PGAP3Q96FM1 320 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 C11orf70Q9BRQ4 267 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 RBSNQ9H1K0 784 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 ANLNQ9NQW6 1124 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 ARHGEF4Q9NR80 690 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 DEC1Q9P2X7 70 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 FBXO4Q9UKT5 387 aa14.49□□□□□ -0.09
TSPAN4-220ENST00000532375 PRRT4C9JH25 899 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 GOLGA8SH3BPF8 625 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.091e-6■■■■□ 19.5
TSPAN4-220ENST00000532375 TSPAN3O60637 253 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 ENDOD1O94919 500 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 GJB6O95452 261 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 HOXD9P28356 352 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 TNFRSF4P43489 277 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 CXCR3P49682 368 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 RNASE9P60153 205 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 ZBED6P86452 979 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 NHLH1Q02575 133 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 ASIC2Q16515 512 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 FAM102AQ5T9C2 384 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 ACAD10Q6JQN1 1059 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 RFWD3Q6PCD5 774 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 TSSK4Q6SA08 328 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 TERB1Q8NA31 727 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 JOSD2Q8TAC2 188 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 BHMTQ93088 406 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 PRMT1Q99873 361 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.48□□□□□ -0.095e-7■■■■□ 20.5
TSPAN4-220ENST00000532375 DDIT4Q9NX09 232 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.48□□□□□ -0.093e-6■■■□□ 18.3
TSPAN4-220ENST00000532375 ADAM22Q9P0K1 906 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 SLC27A6Q9Y2P4 619 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 STARD13Q9Y3M8 1113 aa14.48□□□□□ -0.09
TSPAN4-220ENST00000532375 C2CD4BA6NLJ0 364 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 M0QYT0 321 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 LAMTOR5O43504 91 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 APODP05090 189 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 TNFAIP3P21580 790 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 HNRNPH3P31942 346 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PLA2G5P39877 138 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 CXCL12P48061 93 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 SLC11A2P49281 568 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 KDSRQ06136 332 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PPP2R5DQ14738 602 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 ARID5BQ14865 1188 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 ZNF528Q3MIS6 628 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 SLC25A52Q3SY17 297 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 MPPE1Q53F39 396 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 RAB6CQ53S08 254 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 SARM1Q6SZW1 724 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 KIAA0907Q7Z7F0 614 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 DNAAF5Q86Y56 855 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 VSTM4Q8IW00 320 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 MCOLN2Q8IZK6 566 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 EMC1Q8N766 993 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 CPLX3Q8WVH0 158 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 EXOC4Q96A65 974 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 IQCDQ96DY2 449 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 TMA16Q96EY4 203 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 LMLNQ96KR4 655 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PRICKLE1Q96MT3 831 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 XPO6Q96QU8 1125 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 TBCBQ99426 244 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 RAB6CQ9H0N0 254 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 NUCKS1Q9H1E3 243 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 PIGVQ9NUD9 493 aa14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 DNAJC17Q9NVM6 304 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-220ENST00000532375 RRN3Q9NYV6 651 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms