RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PPP2R5DQ14738 602 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 TRIP4Q15650 581 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 PHLDB2Q86SQ0 1253 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 EMC1Q8N766 993 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 AZIN2Q96A70 460 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 PLD4Q96BZ4 506 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 MRGPRX2Q96LB1 330 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 CFAP57Q96MR6 1250 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 NACA2Q9H009 215 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 RNF38Q9H0F5 515 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 NUP210Q8TEM1 1887 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 FAM170AA1A519 330 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 M0QYT0 321 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 SIAH2O43255 324 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 RNF8O76064 485 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 PROSCO94903 275 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 GJB6O95452 261 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 CKMP06732 381 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
COPB1-208ENST00000532088 GJA1P17302 382 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 OGDHQ02218 1023 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 ZNF252P-AS1Q0IIN9 211 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 STXBP5Q5T5C0 1151 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 OTUD1Q5VV17 481 aaPredicted RBP13.01□□□□□ -0.33
COPB1-208ENST00000532088 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.334e-6■■□□□ 12.7
COPB1-208ENST00000532088 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 TPCN2Q8NHX9 752 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
COPB1-208ENST00000532088 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
COPB1-208ENST00000532088 SLC39A13Q96H72 371 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 ASB16Q96NS5 453 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 TBCBQ99426 244 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 DCLK3Q9C098 648 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 SLITRK6Q9H5Y7 841 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 FAM204AQ9H8W3 233 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 TRPC7Q9HCX4 862 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 TDP1Q9NUW8 608 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
COPB1-208ENST00000532088 DDIT4Q9NX09 232 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 NR2E1Q9Y466 385 aa13.01□□□□□ -0.33
COPB1-208ENST00000532088 TBX18O95935 607 aa13□□□□□ -0.33
COPB1-208ENST00000532088 LAMP2P13473 410 aa13□□□□□ -0.33
COPB1-208ENST00000532088 CCR1P32246 355 aa13□□□□□ -0.33
COPB1-208ENST00000532088 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
COPB1-208ENST00000532088 CXCR3P49682 368 aa13□□□□□ -0.33
COPB1-208ENST00000532088 HDAC4P56524 1084 aa13□□□□□ -0.33
COPB1-208ENST00000532088 TBX4P57082 545 aa13□□□□□ -0.33
COPB1-208ENST00000532088 DEUP1Q05D60 604 aa13□□□□□ -0.33
COPB1-208ENST00000532088 VAC14Q08AM6 782 aa13□□□□□ -0.33
COPB1-208ENST00000532088 USP4Q13107 963 aa13□□□□□ -0.33
COPB1-208ENST00000532088 CLUL1Q15846 466 aa13□□□□□ -0.33
COPB1-208ENST00000532088 TRIM67Q6ZTA4 783 aa13□□□□□ -0.33
COPB1-208ENST00000532088 MTSS1LQ765P7 747 aa13□□□□□ -0.33
COPB1-208ENST00000532088 PSTKQ8IV42 348 aaKnown RBP13□□□□□ -0.33
COPB1-208ENST00000532088 REXO1L1PQ8IX06 675 aa13□□□□□ -0.33
COPB1-208ENST00000532088 SYCE1Q8N0S2 351 aa13□□□□□ -0.33
COPB1-208ENST00000532088 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
COPB1-208ENST00000532088 CELF5Q8N6W0 485 aaKnown RBP13□□□□□ -0.33
COPB1-208ENST00000532088 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
COPB1-208ENST00000532088 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
COPB1-208ENST00000532088 FAM172AQ8WUF8 416 aa13□□□□□ -0.33
COPB1-208ENST00000532088 NXPE3Q969Y0 559 aa13□□□□□ -0.33
COPB1-208ENST00000532088 NTAN1Q96AB6 310 aa13□□□□□ -0.33
COPB1-208ENST00000532088 SLC22A12Q96S37 553 aa13□□□□□ -0.33
COPB1-208ENST00000532088 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
COPB1-208ENST00000532088 THEGQ9P2T0 379 aa13□□□□□ -0.33
COPB1-208ENST00000532088 SFMBT1Q9UHJ3 866 aa13□□□□□ -0.33
COPB1-208ENST00000532088 CDH22Q9UJ99 828 aa13□□□□□ -0.33
COPB1-208ENST00000532088 SALL4Q9UJQ4 1053 aa13□□□□□ -0.33
COPB1-208ENST00000532088 ZNF510Q9Y2H8 683 aa13□□□□□ -0.33
COPB1-208ENST00000532088 CPQQ9Y646 472 aa13□□□□□ -0.33
COPB1-208ENST00000532088 DUSP10Q9Y6W6 482 aa13□□□□□ -0.33
COPB1-208ENST00000532088 DOCK6Q96HP0 2047 aa13□□□□□ -0.33
COPB1-208ENST00000532088 SLC12A8A0AV02 714 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 E2F8A0AVK6 867 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 KCNU1A8MYU2 1149 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 LRCH4O75427 683 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 APOEP02649 317 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 HARS2P49590 506 aaKnown RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 PITX1P78337 314 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms