RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 POU5F1Q01860 360 aaKnown RBP8.69□□□□□ -1.02
CD44-232ENST00000531118 GUCY1B3Q02153 619 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ZRSR1Q15695 479 aaKnown RBP8.69□□□□□ -1.02
CD44-232ENST00000531118 HYIQ5T013 277 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 LIMS2Q7Z4I7 341 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 EID2Q8N6I1 236 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 SYT2Q8N9I0 419 aaPredicted RBP8.69□□□□□ -1.02
CD44-232ENST00000531118 BHMTQ93088 406 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 P2RY11Q96G91 374 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 SLC6A18Q96N87 628 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 FIZ1Q96SL8 496 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ACE2Q9BYF1 805 aaPredicted RBP8.69□□□□□ -1.02
CD44-232ENST00000531118 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ZMYND15Q9H091 742 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 WDR35Q9P2L0 1181 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ADAMTS1Q9UHI8 967 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 SIX4Q9UIU6 781 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 STYXL1Q9Y6J8 313 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 K7ENP7 123 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 VILLO15195 856 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 TSPAN3O60637 253 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 FAM13AO94988 1023 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 RTN3O95197 1032 aaPredicted RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 MT-CO3P00414 261 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 AVPP01185 164 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 MPOP05164 745 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 EPHX1P07099 455 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 KRT19P08727 400 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 PLA2G4BP0C869 781 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 ACO1P21399 889 aaKnown RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 WARSP23381 471 aaKnown RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 LMO2P25791 158 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 YWHAQP27348 245 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 ZNF131P52739 623 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 BCAT1P54687 386 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 MFAP3P55082 362 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 NNTQ13423 1086 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 ZNF234Q14588 700 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 GEN1Q17RS7 908 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 PRAMEF14Q5SWL7 426 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 SFMBT2Q5VUG0 894 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 INO80CQ6PI98 192 aaPredicted RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 ATG14Q6ZNE5 492 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 NECAB1Q8N987 351 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 OR2T3Q8NH03 318 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 MYCBPAPQ8TBZ2 947 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 UCMAQ8WVF2 138 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 VCPIP1Q96JH7 1222 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 MTMR12Q9C0I1 747 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 ELOVL4Q9GZR5 314 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 NACA2Q9H009 215 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 IKZF4Q9H2S9 585 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 PARVGQ9HBI0 331 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 ASCL3Q9NQ33 180 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD44-232ENST00000531118 PLK2Q9NYY3 685 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 LSM7Q9UK45 103 aaKnown RBP8.68□□□□□ -1.02
CD44-232ENST00000531118 SLC27A6Q9Y2P4 619 aa8.68□□□□□ -1.02
CD44-232ENST00000531118 TLR5O60602 858 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 WNT1P04628 370 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 IGHV4-34P06331 123 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 ZDHHC11BP0C7U3 371 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 CKMT2P17540 419 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 SLC5A3P53794 718 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 ERVPABLB-1P60509 514 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 RACK1P63244 317 aaKnown RBP8.67□□□□□ -1.02
CD44-232ENST00000531118 GTF2BQ00403 316 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 IL17AQ16552 155 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 TMEM119Q4V9L6 283 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 ARSHQ5FYA8 562 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 SNX30Q5VWJ9 437 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 SLFN12LQ6IEE8 588 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 HTR3DQ70Z44 454 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 ANKS1BQ7Z6G8 1248 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 GPBP1Q86WP2 473 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 CCDC116Q8IYX3 515 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 MYCT1Q8N699 235 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 EXD3Q8N9H8 876 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 POMGNT1Q8WZA1 660 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 SAAL1Q96ER3 474 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 PLIN2Q99541 437 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 DPH1Q9BZG8 443 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 BTBD1Q9H0C5 482 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 FOXP1Q9H334 677 aaPredicted RBP8.67□□□□□ -1.02
CD44-232ENST00000531118 FBXO10Q9UK96 956 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 NOL7Q9UMY1 257 aaKnown RBP8.67□□□□□ -1.02
CD44-232ENST00000531118 NME7Q9Y5B8 376 aa8.67□□□□□ -1.02
CD44-232ENST00000531118 TBCAO75347 108 aaKnown RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 PENKP01210 267 aaPredicted RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 PDGFRBP09619 1106 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 TMEM191BP0C7N4 346 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 CR2P20023 1033 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 ACP1P24666 158 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 ABCD1P33897 745 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 PRPHP41219 470 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 ARRB1P49407 418 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms