RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ARHGAP17Q68EM7 881 aa16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 METTL3Q86U44 580 aaKnown RBP16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 SETD7Q8WTS6 366 aaKnown RBP16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 NDRG1Q92597 394 aaKnown RBP16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 EDEM1Q92611 657 aa16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 TATDN2Q93075 761 aa16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 SCAND2PQ9GZW5 306 aaPredicted RBP16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 CLEC4EQ9ULY5 219 aa16.53■□□□□ 0.24
CHMP4A-204ENST00000530996 ASCC3Q8N3C0 2202 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 KCNJ18B7U540 433 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 TULP2O00295 520 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 XPO1O14980 1071 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 BCAT2O15382 392 aaPredicted RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 MSI1O43347 362 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 ZNF202O95125 648 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 MATKP42679 507 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 LRMPQ12912 555 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CUL2Q13617 745 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 ZNF366Q8N895 744 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 PNPLA1Q8N8W4 532 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CADM4Q8NFZ8 388 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CYB5D2Q8WUJ1 264 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 NUP58Q9BVL2 599 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 UBXN6Q9BZV1 441 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 LHX5Q9H2C1 402 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 GAREM1Q9H706 876 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 ITM2CQ9NQX7 267 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 ABCB8Q9NUT2 735 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 RMND1Q9NWS8 449 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 SFMBT1Q9UHJ3 866 aa16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 EIF2B4Q9UI10 523 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 APOBEC2Q9Y235 224 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-204ENST00000530996 CACNA1EQ15878 2313 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 ASPMQ8IZT6 3477 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 FAM237AA0A1B0GTK4 181 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 A0A1W2PQ27 194 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 A0A1W2PQ64 194 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 SLC16A3O15427 465 aaKnown RBP16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 GJB3O75712 270 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 LCP1P13796 627 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 COPAP53621 1224 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 PNOCQ13519 176 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 ENPP2Q13822 863 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 CHST9Q7L1S5 443 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 OR2T3Q8NH03 318 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 UBA3Q8TBC4 463 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 WFIKKN2Q8TEU8 576 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 IL21RQ9HBE5 538 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 GDPD2Q9HCC8 539 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 GGA2Q9UJY4 613 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 PLA2G4CQ9UP65 541 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 HBS1LQ9Y450 684 aaKnown RBP16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
CHMP4A-204ENST00000530996 TIMM44O43615 452 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 ZNF445P59923 1031 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 TRIP4Q15650 581 aaPredicted RBP16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 TMEM215Q68D42 235 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 IL27RAQ6UWB1 636 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 RAB44Q7Z6P3 723 aaPredicted RBP16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 FAM217AQ8IXS0 508 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 AHI1Q8N157 1196 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 LHX6Q9UPM6 363 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 FNDC3AQ9Y2H6 1198 aaKnown RBP16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 GON4LQ3T8J9 2241 aa16.5■□□□□ 0.23
CHMP4A-204ENST00000530996 FAM208BQ5VWN6 2430 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 ADAMTS9Q9P2N4 1935 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 SPEGQ15772 3267 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 A0A1B0GVT2 93 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 METTL12A8MUP2 240 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 E7ENQ6 273 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 M0QYV0 167 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 PABPC1P11940 636 aaKnown RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 TBXAS1P24557 533 aaPredicted RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 HLA-FP30511 346 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 RGS7P49802 495 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 TTC31Q49AM3 519 aaPredicted RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 BSPRYQ5W0U4 402 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 PM20D1Q6GTS8 502 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 BHLHA9Q7RTU4 235 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 GANCQ8TET4 914 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 TMA16Q96EY4 203 aaKnown RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 TM7SF3Q9NS93 570 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 ARMCX3Q9UH62 379 aaPredicted RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 PCOLCE2Q9UKZ9 415 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
CHMP4A-204ENST00000530996 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
CHMP4A-204ENST00000530996 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
CHMP4A-204ENST00000530996 GOLGA8CPA6NN73 597 aa16.48■□□□□ 0.23
CHMP4A-204ENST00000530996 PIK3R2O00459 728 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms