RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 DHX35Q9H5Z1 703 aaKnown RBP12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 L2HGDHQ9H9P8 463 aa12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 ARHGEF38Q9NXL2 777 aa12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 CALCOCO1Q9P1Z2 691 aa12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 TTC7AQ9ULT0 858 aaPredicted RBP12.24□□□□□ -0.45
TM9SF1-207ENST00000528895 ZNF638Q14966 1978 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 C2orf78A6NCI8 922 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 H3BRJ5 948 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 OLFM2O95897 454 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 MOCS2O96007 188 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 FGGP02679 453 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 CKMP06732 381 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 PYGMP11217 842 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 HOXB8P17481 243 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 KDELR1P24390 212 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 HTR7P34969 479 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 ADRA1BP35368 520 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 HARS2P49590 506 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 EIF4EBP2Q13542 120 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 KCNC3Q14003 757 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 ZC3H12AQ5D1E8 599 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 PPP6R3Q5H9R7 873 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 TXNRD3NBQ6F5E7 133 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 SPOCD1Q6ZMY3 1216 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 GAREM2Q75VX8 874 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 TMEM150AQ86TG1 271 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 DDX42Q86XP3 938 aaKnown RBP eCLIP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 CREG2Q8IUH2 290 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 ZNF707Q96C28 371 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 ACSF2Q96CM8 615 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 SLC39A13Q96H72 371 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 FCRL2Q96LA5 508 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 HAPLN3Q96S86 360 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 MAK16Q9BXY0 300 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 OSBPL8Q9BZF1 889 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 SLITRK6Q9H5Y7 841 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 GPATCH2LQ9NWQ4 482 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 HCFC1R1Q9NWW0 138 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 DNMT3BQ9UBC3 853 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 LSM7Q9UK45 103 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 EFR3BQ9Y2G0 817 aa12.23□□□□□ -0.45
TM9SF1-207ENST00000528895 CTAGE15A4D2H0 777 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 ZNF185O15231 689 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TJP3O95049 919 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TBX18O95935 607 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 IGLV3-27P01718 113 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 HMBSP08397 361 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 CTAGE8P0CG41 777 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 ZFXP17010 805 aaPredicted RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 HDCP19113 662 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 AVPR1AP37288 418 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 SLC11A2P49281 568 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TPI1P60174 286 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 SLC7A9P82251 487 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TFDP2Q14188 446 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 DPYSL3Q14195 570 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 GPR158Q5T848 1215 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TXNDC8Q6A555 127 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 ANKRD54Q6NXT1 300 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TMC5Q6UXY8 1006 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 GRASPQ7Z6J2 395 aaPredicted RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 CTAGE6Q86UF2 777 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 RFX6Q8HWS3 928 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 CTAGE4Q8IX94 777 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 MAB21L3Q8N8X9 362 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 VN1R2Q8NFZ6 395 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 FAM71BQ8TC56 605 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 ATXN2LQ8WWM7 1075 aaKnown RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 BTN2A3PQ96KV6 586 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 DDX50Q9BQ39 737 aaKnown RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 PRDM16Q9HAZ2 1276 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 PCDH18Q9HCL0 1135 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 MRPS23Q9Y3D9 190 aaKnown RBP12.22□□□□□ -0.45
TM9SF1-207ENST00000528895 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 OBSL1O75147 1896 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 hCG_1818297A0A087WSY0 165 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 DAPK3O43293 454 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 CREB3O43889 395 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 LATS1O95835 1130 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 GLP2RO95838 553 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 POU3F3P20264 500 aaPredicted RBP12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 IGFBP4P22692 258 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 L1CAMP32004 1257 aa12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.45
TM9SF1-207ENST00000528895 CDKN2BP42772 138 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms