RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	TM7SF2	O76062	418 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	GSR	P00390	522 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	GRIA1	P42261	906 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	SESN3	P58005	492 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	ZBTB6	Q15916	424 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	ZNF410	Q86VK4	478 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	TFB1M	Q8WVM0	346 aa	Known RBP	24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	HTR3C	Q8WXA8	447 aa		24.13	■■□□□ 1.45
GSDMD-208	ENST00000528475	SDR42E2	A6NKP2	422 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	GLRA3	O75311	464 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SKAP2	O75563	359 aa	Predicted RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	LINGO3	P0C6S8	592 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SKI	P12755	728 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	BST2	Q10589	180 aa	Known RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	THOC5	Q13769	683 aa	Known RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	TRMT5	Q32P41	509 aa	Known RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	LRRC8B	Q6P9F7	803 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	DLK2	Q6UY11	383 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	ARMCX2	Q7L311	632 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	STRADA	Q7RTN6	431 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SCUBE1	Q8IWY4	988 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	PPTC7	Q8NI37	304 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SCG3	Q8WXD2	468 aa	Known RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	FAM161B	Q96MY7	647 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SPDYE5	A6NIY4	337 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	CPA2	P48052	419 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	ANKRD52	Q8NB46	1076 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SHCBP1	Q8NEM2	672 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	EMID1	Q96A84	441 aa	Predicted RBP	24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	SNX27	Q96L92	541 aa		24.12	■■□□□ 1.45
GSDMD-208	ENST00000528475	PPEF2	O14830	753 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	VAV1	P15498	845 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	AOC1	P19801	751 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	ATXN1	P54253	815 aa	Known RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	BCAT1	P54687	386 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	FASTKD1	Q53R41	847 aa	Known RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	MBLAC2	Q68D91	279 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	TAPT1	Q6NXT6	567 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	MAMDC4	Q6UXC1	1216 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	WDR75	Q8IWA0	830 aa	Known RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	PPFIBP2	Q8ND30	876 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	CDKL2	Q92772	493 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	ANGPTL2	Q9UKU9	493 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	SCN1A	P35498	2009 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	CAPN15	O75808	1086 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	KIT	P10721	976 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	ACADSB	P45954	432 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	SOWAHA	Q2M3V2	549 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	PACS1	Q6VY07	963 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	PSTK	Q8IV42	348 aa	Known RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	CLEC4C	Q8WTT0	213 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	ZMAT2	Q96NC0	199 aa	Known RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	C16orf70	Q9BSU1	422 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	DNAJB4	Q9UDY4	337 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	MARCO	Q9UEW3	520 aa	Predicted RBP	24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	EMCN	Q9ULC0	261 aa		24.11	■■□□□ 1.45
GSDMD-208	ENST00000528475	WDR27	A2RRH5	827 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	AMPD1	P23109	780 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	C6orf163	Q5TEZ5	329 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	DENND5B	Q6ZUT9	1274 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	CRYBG2	Q8N1P7	616 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	CCDC185	Q8N715	623 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	BEST2	Q8NFU1	509 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	OR6B3	Q8NGW1	331 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	FBXO27	Q8NI29	283 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	PIWIL2	Q8TC59	973 aa	Known RBP	24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	NAT9	Q9BTE0	207 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	DCDC2	Q9UHG0	476 aa		24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	24.1	■■□□□ 1.45
GSDMD-208	ENST00000528475	KAT6A	Q92794	2004 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	RBM47	A0AV96	593 aa	Known RBP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	CIB2	O75838	187 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ALDOA	P04075	364 aa	Known RBP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	FGF3	P11487	239 aa	Predicted RBP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	PGAM1	P18669	254 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ARL4A	P40617	200 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	TUBB3	Q13509	450 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	INSC	Q1MX18	579 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	GJC2	Q5T442	439 aa	Predicted RBP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	TEDDM1	Q5T9Z0	273 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	RILP	Q96NA2	401 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	MAGEB5	Q9BZ81	275 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	DPPA5	A6NC42	116 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	DCAF8L1	A6NGE4	600 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	PLIN3	O60664	434 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	OPHN1	O60890	802 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	NPTXR	O95502	500 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	PDHA1	P08559	390 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ACTR3	P61158	418 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	GRIK3	Q13003	919 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	MYLK4	Q86YV6	388 aa	Predicted RBP	24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ULK2	Q8IYT8	1036 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	COLGALT1	Q8NBJ5	622 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	PPP1R14C	Q8TAE6	165 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ARNTL2	Q8WYA1	636 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	ATP2A3	Q93084	1043 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	HSFY1	Q96LI6	401 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	CXCL16	Q9H2A7	254 aa		24.09	■■□□□ 1.45
GSDMD-208	ENST00000528475	DPEP3	Q9H4B8	488 aa		24.09	■■□□□ 1.45

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms