RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PLCB1Q9NQ66 1216 aa34.39■■■■□ 3.1
SSSCA1-205ENST00000527920 ASNSD1Q9NWL6 643 aa34.39■■■■□ 3.1
SSSCA1-205ENST00000527920 TAB2Q9NYJ8 693 aa34.39■■■■□ 3.1
SSSCA1-205ENST00000527920 FHOD1Q9Y613 1164 aa34.39■■■■□ 3.1
SSSCA1-205ENST00000527920 A0A1W2PQF6 199 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 UCHL3P15374 230 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 SDHBP21912 280 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 KRT9P35527 623 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 SNX16P57768 344 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 BYSLQ13895 437 aaKnown RBP34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 DRAP1Q14919 205 aaPredicted RBP34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 GEN1Q17RS7 908 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 UCMAQ8WVF2 138 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 RMDN1Q96DB5 314 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 TMA16Q96EY4 203 aaKnown RBP34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 PPP1R13BQ96KQ4 1090 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 FCRL2Q96LA5 508 aaPredicted RBP34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 ACOX2Q99424 681 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 BCCIPQ9P287 314 aaKnown RBP eCLIP34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 CEP83Q9Y592 693 aa34.38■■■■□ 3.09
SSSCA1-205ENST00000527920 CAPN9O14815 690 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 DCLK1O15075 740 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 ACSL4O60488 711 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 TPM2P07951 284 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 P2RY2P41231 377 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 RAPGEF1Q13905 1077 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 KRT31Q15323 416 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 HMGB4Q8WW32 186 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 DDX50Q9BQ39 737 aaKnown RBP34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 LSM14BQ9BX40 385 aaKnown RBP34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 DLL3Q9NYJ7 618 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 CLEC4EQ9ULY5 219 aa34.37■■■■□ 3.09
SSSCA1-205ENST00000527920 SDK1Q7Z5N4 2213 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 DCHS1Q96JQ0 3298 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 TIMM44O43615 452 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 PNMA6AP0CW24 399 aaPredicted RBP34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 MYL5Q02045 173 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 ENPP2Q13822 863 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 FAM133BQ5BKY9 247 aaKnown RBP34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 SYPL2Q5VXT5 272 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 PMS2CLQ68D20 193 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 C11orf57Q6ZUT1 292 aaPredicted RBP34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 TAC4Q86UU9 113 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 SPACA7Q96KW9 195 aa34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 THAP10Q9P2Z0 257 aaPredicted RBP34.36■■■■□ 3.09
SSSCA1-205ENST00000527920 TSPAN3O60637 253 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 IGLV3-25P01717 112 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 PIK3R6Q5UE93 754 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 PRR23CQ6ZRP0 262 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 PASD1Q8IV76 773 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 DDX51Q8N8A6 666 aaKnown RBP eCLIP34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 ZNF557Q8N988 423 aaPredicted RBP34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 C1orf131Q8NDD1 294 aaKnown RBP34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 STK33Q9BYT3 514 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 ARRDC1-AS1Q9H2J1 176 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 FANCLQ9NW38 375 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 ELOVL2Q9NXB9 296 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 TJP2Q9UDY2 1190 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 DAAM1Q9Y4D1 1078 aa34.35■■■■□ 3.09
SSSCA1-205ENST00000527920 ZBTB24O43167 697 aaPredicted RBP34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 GABRG2P18507 467 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 GBP1P32455 592 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 WASP42768 502 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 PUM1Q14671 1186 aaKnown RBP eCLIP34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 EFHC1Q5JVL4 640 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 WFIKKN2Q8TEU8 576 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 IPO4Q8TEX9 1081 aaKnown RBP34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 SLC2A13Q96QE2 648 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 CACNA2D2Q9NY47 1150 aa34.34■■■■□ 3.09
SSSCA1-205ENST00000527920 HSF2BPO75031 334 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 ZNF806P0C7X5 589 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 CYP11B1P15538 503 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 CDH5P33151 784 aaPredicted RBP34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 PLA2G2CQ5R387 149 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 VPS16Q9H269 839 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 STON1Q9Y6Q2 735 aa34.33■■■■□ 3.09
SSSCA1-205ENST00000527920 F8VZ95 297 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 TRUB2O95900 331 aaKnown RBP34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC6A4P31645 630 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 EIF4EBP2Q13542 120 aaPredicted RBP34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 MAP7D1Q3KQU3 841 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 FKBP15Q5T1M5 1219 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 OLFML1Q6UWY5 402 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 ERMP1Q7Z2K6 904 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 ANKRD20A12PQ8NF67 263 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 INVSQ9Y283 1065 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 CACNA1AO00555 2505 aa34.32■■■■□ 3.08
SSSCA1-205ENST00000527920 APOEP02649 317 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 BCKDHBP21953 392 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 HLA-FP30511 346 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 MPLP40238 635 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 TAF5Q15542 800 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 RSPO4Q2I0M5 234 aaPredicted RBP34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 PTPN20Q4JDL3 420 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 SPDYCQ5MJ68 293 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 NADSYN1Q6IA69 706 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 KIAA1211LQ6NV74 962 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 RFWD3Q6PCD5 774 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC26A9Q7LBE3 791 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 KIAA0907Q7Z7F0 614 aaPredicted RBP34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms