RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 ASIC3Q9UHC3 531 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 SNX24Q9Y343 169 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 IRAK3Q9Y616 596 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 I6L893 689 aaPredicted RBP21.23■□□□□ 0.99
SMCO4-203ENST00000526869 TEX28O15482 410 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 RBP3P10745 1247 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 ITIH2P19823 946 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 ELF1P32519 619 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 NRG1Q02297 640 aaPredicted RBP21.23■□□□□ 0.99
SMCO4-203ENST00000526869 CAV1Q03135 178 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 UBE3AQ05086 875 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 MTA1Q13330 715 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 PLD1Q13393 1074 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 RFX8Q6ZV50 586 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 TADA2BQ86TJ2 420 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 MREGQ8N565 214 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 SLC39A13Q96H72 371 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 TRIM31Q9BZY9 425 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 VIPAS39Q9H9C1 493 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 SAE1Q9UBE0 346 aaPredicted RBP21.23■□□□□ 0.99
SMCO4-203ENST00000526869 RAD54BQ9Y620 910 aa21.23■□□□□ 0.99
SMCO4-203ENST00000526869 MAP2K7O14733 419 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 DNAJB2P25686 324 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 IVDP26440 423 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 STIP1P31948 543 aaKnown RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 CTNNB1P35222 781 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 TNNT3P45378 269 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 KPNA1P52294 538 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 CALCOCO2Q13137 446 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 PAFAH1B3Q15102 231 aaKnown RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 TRIP4Q15650 581 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 ACBD5Q5T8D3 534 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 NCBP2-AS2Q69YL0 99 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 ZDHHC24Q6UX98 284 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 NPNTQ6UXI9 565 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 CDKL3Q8IVW4 592 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-203ENST00000526869 AUTS2Q8WXX7 1259 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 ART4Q93070 314 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 MAGEB5Q9BZ81 275 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 TMPRSS4Q9NRS4 437 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 INSL5Q9Y5Q6 135 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 PLXNA4Q9HCM2 1894 aa21.22■□□□□ 0.99
SMCO4-203ENST00000526869 BCLAF3A2AJT9 711 aaKnown RBP21.21■□□□□ 0.99
SMCO4-203ENST00000526869 LCHNA4D1U4 455 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 KCNU1A8MYU2 1149 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 C5orf67F2Z3F1 127 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 PRRG1O14668 218 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 DCLK1O15075 740 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 CNPP09543 421 aaKnown RBP21.21■□□□□ 0.99
SMCO4-203ENST00000526869 HMGA1P17096 107 aaKnown RBP21.21■□□□□ 0.99
SMCO4-203ENST00000526869 AMPD1P23109 780 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 PPP3CCP48454 512 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 TPI1P60174 286 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 RING1Q06587 406 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 CASP8Q14790 479 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 C1orf228Q6PIY5 440 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 PDZD4Q76G19 769 aaPredicted RBP21.21■□□□□ 0.99
SMCO4-203ENST00000526869 RSAD2Q8WXG1 361 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 RTP4Q96DX8 246 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 FMO2Q99518 471 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 NEUROG2Q9H2A3 272 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 MTRF1LQ9UGC7 380 aaKnown RBP21.21■□□□□ 0.99
SMCO4-203ENST00000526869 OR12D3Q9UGF7 316 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 SFMBT1Q9UHJ3 866 aa21.21■□□□□ 0.99
SMCO4-203ENST00000526869 LINC01553A4QN01 128 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 HACD1B0YJ81 288 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 SGK1O00141 431 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 CREB3O43889 395 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 CXCL14O95715 111 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 C1RP00736 705 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 RB1P06400 928 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 ADH1AP07327 375 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 ADCY8P40145 1251 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 TUBP50607 506 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 EPHB3P54753 998 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 TBX4P57082 545 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 C10orf120Q5SQS8 335 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 KLHDC10Q6PID8 442 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 ITIH5Q86UX2 942 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 LRRC45Q96CN5 670 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 FCRL2Q96LA5 508 aaPredicted RBP21.2■□□□□ 0.98
SMCO4-203ENST00000526869 C1orf74Q96LT6 269 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 OLFM3Q96PB7 478 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 TMEM121Q9BTD3 319 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 EMILIN2Q9BXX0 1053 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 MARCH2Q9P0N8 246 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 UXTQ9UBK9 157 aaPredicted RBP21.2■□□□□ 0.98
SMCO4-203ENST00000526869 HBS1LQ9Y450 684 aaKnown RBP21.2■□□□□ 0.98
SMCO4-203ENST00000526869 ASB3Q9Y575 518 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 HEY1Q9Y5J3 304 aa21.2■□□□□ 0.98
SMCO4-203ENST00000526869 FAM72CH0Y354 149 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 H7C0C1 242 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 MSI1O43347 362 aaKnown RBP21.19■□□□□ 0.98
SMCO4-203ENST00000526869 PAGE1O75459 146 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 IGLV3-27P01718 113 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 APOEP02649 317 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 FAM153BP0C7A2 387 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 HOXC13P31276 330 aa21.19■□□□□ 0.98
SMCO4-203ENST00000526869 HSPA9P38646 679 aaKnown RBP21.19■□□□□ 0.98
SMCO4-203ENST00000526869 ATP5OP48047 213 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms