RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 KIF9Q9HAQ2 790 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 TRPV4Q9HBA0 871 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 ANLNQ9NQW6 1124 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 LSM7Q9UK45 103 aaKnown RBP14.25□□□□□ -0.13
CD44-224ENST00000526669 WNT6Q9Y6F9 365 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 CAPN6Q9Y6Q1 641 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 UNC80Q8N2C7 3258 aa14.25□□□□□ -0.13
CD44-224ENST00000526669 GOLGA6L7A0A1B0GV03 622 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 GRID2IPA4D2P6 1211 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 TRDMT1O14717 391 aaKnown RBP14.24□□□□□ -0.13
CD44-224ENST00000526669 ZSCAN12O43309 604 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 F9P00740 461 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 CCR1P32246 355 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 KPNA1P52294 538 aaPredicted RBP14.24□□□□□ -0.13
CD44-224ENST00000526669 VCPP55072 806 aaKnown RBP14.24□□□□□ -0.13
CD44-224ENST00000526669 HADHBP55084 474 aaKnown RBP14.24□□□□□ -0.13
CD44-224ENST00000526669 TAS2R40P59535 323 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 TRIM68Q6AZZ1 485 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 TXNRD3NBQ6F5E7 133 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 DAAM2Q86T65 1068 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 BBS7Q8IWZ6 715 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 NIPA2Q8N8Q9 360 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 ELSPBP1Q96BH3 223 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 ASIC4Q96FT7 647 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 ZWILCHQ9H900 591 aa14.24□□□□□ -0.13
CD44-224ENST00000526669 F5P12259 2224 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 NYNRINQ9P2P1 1898 aaKnown RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 I6L893 689 aaPredicted RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 SPOPO43791 374 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 GREM1O60565 184 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 PALMO75781 387 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 COMTP21964 271 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 IL1R2P27930 398 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 IFNAR2P48551 515 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 HARS2P49590 506 aaKnown RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 ZP2Q05996 745 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 RING1Q06587 406 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 BRMS1LQ5PSV4 323 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 RAP1GAP2Q684P5 730 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 NUGGCQ68CJ6 796 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 NADSYN1Q6IA69 706 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 Q6ZNB5 142 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 MFSD6LQ8IWD5 586 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 ADHFE1Q8IWW8 467 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 YAF2Q8IY57 180 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 ZDHHC14Q8IZN3 488 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 CCAR2Q8N163 923 aaKnown RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 SNRNP25Q9BV90 132 aaKnown RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 DCLK3Q9C098 648 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 SIK2Q9H0K1 926 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 LINC00597Q9H2U6 94 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 KLHL11Q9NVR0 708 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD44-224ENST00000526669 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 AGO1Q9UL18 857 aaKnown RBP14.23□□□□□ -0.13
CD44-224ENST00000526669 USP18Q9UMW8 372 aa14.23□□□□□ -0.13
CD44-224ENST00000526669 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ANHXE9PGG2 379 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 PRPSAP2O60256 369 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ACSL4O60488 711 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 TSPAN3O60637 253 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 PAGE1O75459 146 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ECI2O75521 394 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 FTCDO95954 541 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ARSAP15289 507 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 TCF3P15923 654 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 GDI1P31150 447 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 SLC6A4P31645 630 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 MAN1A1P33908 653 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 IFI16Q16666 785 aaKnown RBP14.22□□□□□ -0.13
CD44-224ENST00000526669 CA9Q16790 459 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 PIK3R6Q5UE93 754 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 C11orf63Q6NUN7 778 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 RFWD3Q6PCD5 774 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 CYP4V2Q6ZWL3 525 aaPredicted RBP14.22□□□□□ -0.13
CD44-224ENST00000526669 HTR3DQ70Z44 454 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 CHSY1Q86X52 802 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 PYROXD2Q8N2H3 581 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
CD44-224ENST00000526669 HSPH1Q92598 858 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ASB2Q96Q27 587 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 KCNK12Q9HB15 430 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 DUS2Q9NX74 493 aaKnown RBP14.22□□□□□ -0.13
CD44-224ENST00000526669 OBP2AQ9NY56 170 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 SLC12A6Q9UHW9 1150 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 FZD10Q9ULW2 581 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 HS3ST4Q9Y661 456 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 ALG6Q9Y672 507 aa14.22□□□□□ -0.13
CD44-224ENST00000526669 SLC2A3P11169 496 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 BMP1P13497 986 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms