RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CCR1P32246 355 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 PTPN9P43378 593 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 SLC11A2P49281 568 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 CXCR3P49682 368 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 RPL7AP62424 266 aaKnown RBP13.43□□□□□ -0.26
SMPD1-202ENST00000526280 AMPD2Q01433 879 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 DEUP1Q05D60 604 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 PPP2R5DQ14738 602 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 GAB4Q2WGN9 574 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 TMEM31Q5JXX7 168 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ADGRF1Q5T601 910 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 C1orf228Q6PIY5 440 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ZNF852Q6ZMS4 543 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 BMP8AQ7Z5Y6 402 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 CPXM2Q8N436 756 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ZNF653Q96CK0 615 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 MCEEQ96PE7 176 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 THAP2Q9H0W7 228 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 PIGVQ9NUD9 493 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 COX16Q9P0S2 106 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 KANSL1LA0AUZ9 987 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GFRA2O00451 464 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 HOXC11O43248 304 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 ACSL4O60488 711 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GPR37L1O60883 481 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 APOEP02649 317 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 ADH5P11766 374 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GPD1P21695 349 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 CD72P21854 359 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 ZNF143P52747 638 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GALCP54803 685 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 VCPP55072 806 aaKnown RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 ATP11AP98196 1134 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GAD2Q05329 585 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 C15orf59Q2T9L4 293 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 DCUN1D2Q6PH85 259 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 TXNDC11Q6PKC3 985 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 TPGS1Q6ZTW0 290 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 FAM3CQ92520 227 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 CENPIQ92674 756 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 RNF34Q969K3 372 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 PBXIP1Q96AQ6 731 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 BTN2A3PQ96KV6 586 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 LRFN3Q9BTN0 628 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 MFSD1Q9H3U5 465 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 WDCPQ9H6R7 721 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 TBC1D17Q9HA65 648 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
SMPD1-202ENST00000526280 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 SCINQ9Y6U3 715 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 COL4A3Q01955 1670 aa13.42□□□□□ -0.26
SMPD1-202ENST00000526280 GOLGA6L7A0A1B0GV03 622 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 TRDMT1O14717 391 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 MOCS2O96007 188 aaPredicted RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 CYP1A2P05177 515 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 PTMAP06454 111 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 RDXP35241 583 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 ATXN1P54253 815 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 MTA1Q13330 715 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 ANO4Q32M45 955 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 FAM133BQ5BKY9 247 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 SH3PXD2AQ5TCZ1 1133 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 SND1Q7KZF4 910 aaKnown RBP eCLIP13.41□□□□□ -0.269e-8■■□□□ 11.8
SMPD1-202ENST00000526280 STRADAQ7RTN6 431 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 CCDC170Q8IYT3 715 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 ATP6V0D2Q8N8Y2 350 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 FNIP1Q8TF40 1166 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 P2RY11Q96G91 374 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 NELL2Q99435 816 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 DDX50Q9BQ39 737 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 CNPY3Q9BT09 278 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 BBS2Q9BXC9 721 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 ARHGEF38Q9NXL2 777 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 XPO7Q9UIA9 1087 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 MRPS17Q9Y2R5 130 aaKnown RBP13.41□□□□□ -0.26
SMPD1-202ENST00000526280 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
SMPD1-202ENST00000526280 GOLGA6L6A8MZA4 724 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 NEDD8-MDP1E9PL57 170 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 STK25O00506 426 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 LCA5LO95447 670 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 PENKP01210 267 aaPredicted RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 TYRP14679 529 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 SLC6A4P31645 630 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 OPRD1P41143 372 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 EIF2DP41214 584 aaKnown RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 SLC6A11P48066 632 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 GALK1P51570 392 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 HDAC4P56524 1084 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 OGDHQ02218 1023 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms