RNA–Protein interactions for RNA: ENST00000526128.1

PUM1-217, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-217	ENST00000526128	NCKAP1L	P55160	1127 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	TPD52	P55327	224 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ARPP19	P56211	112 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	NTHL1	P78549	312 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DR1	Q01658	176 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CREM	Q03060	361 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ELAVL2	Q12926	359 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SERINC3	Q13530	473 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SLC10A6	Q3KNW5	377 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ZCWPW2	Q504Y3	356 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	XKR4	Q5GH76	650 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ANKRD20A2	Q5SQ80	823 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DEPDC1	Q5TB30	811 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ANKRD20A1	Q5TYW2	823 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ANKRD20A3	Q5VUR7	823 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CD300LG	Q6UXG3	332 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	LRIG3	Q6UXM1	1119 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ZPBP2	Q6X784	338 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	C15orf39	Q6ZRI6	1047 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	OTOP3	Q7RTS5	596 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DYM	Q7RTS9	669 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	LYSMD3	Q7Z3D4	306 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DHX40	Q8IX18	779 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	GPR65	Q8IYL9	337 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ESX1	Q8N693	406 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ARL10	Q8N8L6	244 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CMAS	Q8NFW8	434 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	PIP4K2C	Q8TBX8	421 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	FBF1	Q8TES7	1133 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	RSAD2	Q8WXG1	361 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CCT6B	Q92526	530 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	LARP4B	Q92615	738 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CDKL2	Q92772	493 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ASIC4	Q96FT7	647 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	VPS50	Q96JG6	964 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SUSD3	Q96L08	255 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	UROC1	Q96N76	676 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	USP28	Q96RU2	1077 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	MYADM	Q96S97	322 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	PNKP	Q96T60	521 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DUSP9	Q99956	384 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	WDR6	Q9NNW5	1121 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SAMSN1	Q9NSI8	373 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SLC38A7	Q9NVC3	462 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	ZDHHC3	Q9NYG2	299 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	KCND2	Q9NZV8	630 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	VTI1B	Q9UEU0	232 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	FBXO2	Q9UK22	296 aa	Predicted RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	TBX20	Q9UMR3	447 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SORCS3	Q9UPU3	1222 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	EFR3B	Q9Y2G0	817 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	LRCH1	Q9Y2L9	728 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	NOSIP	Q9Y314	301 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	SRPRB	Q9Y5M8	271 aa	Known RBP	5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CDY1	Q9Y6F8	540 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CIT	O14578	2027 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DOCK6	Q96HP0	2047 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	CLUH	O75153	1309 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	DMXL1	Q9Y485	3027 aa		5.99	□□□□□ -1.45
PUM1-217	ENST00000526128	VWA8	A3KMH1	1905 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	KANSL1L	A0AUZ9	987 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	GMNC	A6NCL1	334 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	FIGNL2	A6NMB9	653 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	LACTBL1	A8MY62	500 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TISP43	B9A030	160 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	ANKRD63	C9JTQ0	380 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128		H0YCG3	227 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	GOLGA8T	H3BQL2	631 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TGFBR3L	H3BV60	316 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TMEM189-UBE2V1	I3L0A0	370 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	AGPS	O00116	658 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	HNRNPDL	O14979	420 aa	Known RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TRAPPC3	O43617	180 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	NARS	O43776	548 aa	Known RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	C8A	P07357	584 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.98	□□□□□ -1.45	2e-6	■■■■□ 20.4
PUM1-217	ENST00000526128	CLTA	P09496	248 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	NAT2	P11245	290 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	KCNE1	P15382	129 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	RHOQ	P17081	205 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	GMPR	P36959	345 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	GNAL	P38405	381 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TNFSF9	P41273	254 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	GUCY2F	P51841	1108 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	VCP	P55072	806 aa	Known RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	RPL26	P61254	145 aa	Known RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	MCL1	Q07820	350 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	HSPA14	Q0VDF9	509 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	ADAM9	Q13443	819 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	BIRC3	Q13489	604 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	RAB33A	Q14088	237 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	CYLC2	Q14093	348 aa	Predicted RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	TAF11	Q15544	211 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	ACCSL	Q4AC99	568 aa		5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.98	□□□□□ -1.45
PUM1-217	ENST00000526128	PPM1L	Q5SGD2	360 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms