RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SDE2Q6IQ49 451 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 DNAJC14Q6Y2X3 702 aaPredicted RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 ZNF614Q8N883 585 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 ZNF384Q8TF68 577 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 RUBCNQ92622 972 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 SMARCD1Q96GM5 515 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 PCDH9Q9HC56 1237 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 SCHIP1Q9P0W5 487 aaPredicted RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 ITM2BQ9Y287 266 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 FAM32AQ9Y421 112 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 CEP290O15078 2479 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 ZNF541Q9H0D2 1346 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 HNRNPCL2B2RXH8 293 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 HNRNPCL1O60812 293 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 VPS26AO75436 327 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 UBOX5O94941 541 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 FBXO21O94952 628 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 CST3P01034 146 aaPredicted RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 MAXP61244 160 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 UBE3AQ05086 875 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 DDR2Q16832 855 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 C15orf52Q6ZUT6 534 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 UNC45BQ8IWX7 931 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 RAB42Q8N4Z0 105 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 B3GALNT2Q8NCR0 500 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 BAP1Q92560 729 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 KCNK16Q96T55 309 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 RERGLQ9H628 205 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 MARCH2Q9P0N8 246 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 ZNF212Q9UDV6 495 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 PCDHB12Q9Y5F1 795 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 TRPV2Q9Y5S1 764 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 NUMA1Q14980 2115 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 FAM95CA0A1B0GW59 222 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 GLRA3O75311 464 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 BAIAP3O94812 1187 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 KLHL2O95198 593 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 GLP2RO95838 553 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 TRUB2O95900 331 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 ABCE1P61221 599 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 FMO1Q01740 532 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 MAMLD1Q13495 774 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 N4BP2L1Q5TBK1 243 aaPredicted RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 RAP1GAP2Q684P5 730 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 OTOAQ7RTW8 1153 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 SUGP1Q8IWZ8 645 aaKnown RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 USP13Q92995 863 aaPredicted RBP8.53□□□□□ -1.04
CHD7-203ENST00000525508 ACOX2Q99424 681 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 SLC40A1Q9NP59 571 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 PLK2Q9NYY3 685 aa8.53□□□□□ -1.04
CHD7-203ENST00000525508 DNALI1O14645 258 aaPredicted RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 COPAP53621 1224 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 MED21Q13503 144 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 FLOT2Q14254 428 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 ZACNQ401N2 412 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 LGMNQ99538 433 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 SYT17Q9BSW7 474 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 CD248Q9HCU0 757 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 NINJ2Q9NZG7 142 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 DSEQ9UL01 958 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 NRCAMQ92823 1304 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 KLRG2A4D1S0 409 aaPredicted RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 TIMM44O43615 452 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 OR4Q2P0C623 313 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 KDELR1P24390 212 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 ADRA1DP25100 572 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 SP3Q02447 781 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 ZNF844Q08AG5 666 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 KBTBD12Q3ZCT8 623 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 TEDDM1Q5T9Z0 273 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 KDM7AQ6ZMT4 941 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 PHACTR4Q8IZ21 702 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 RIBC1Q8N443 379 aaPredicted RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 C4orf32Q8N8J7 132 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 OR52K1Q8NGK4 314 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 DIS3LQ8TF46 1054 aaKnown RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 CNDP1Q96KN2 507 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 MRIQ9BWK5 157 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 GANQ9H2C0 597 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 MRPL40Q9NQ50 206 aaKnown RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 SMAPO00193 183 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 MAFO75444 373 aaPredicted RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 SHBGP04278 402 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 IGFBP4P22692 258 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 PLOD1Q02809 727 aaPredicted RBP8.52□□□□□ -1.05
CHD7-203ENST00000525508 MGAT5Q09328 741 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 DEFB115Q30KQ5 88 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 TTLL9Q3SXZ7 439 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 DNAL1Q4LDG9 190 aa8.52□□□□□ -1.05
CHD7-203ENST00000525508 AGGF1Q8N302 714 aaeCLIP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms