RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 COL4A3Q01955 1670 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 SYNJ2BP-COX16A0A087WUM0 186 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 BTNL10A8MVZ5 291 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 CDO1Q16878 200 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 DENND1CQ8IV53 801 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 FAM217AQ8IXS0 508 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 CPXM2Q8N436 756 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 CPA6Q8N4T0 437 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 COX16Q9P0S2 106 aa19.43■□□□□ 0.7
PTPRK-218ENST00000525459 PJA2O43164 708 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ARHGAP25P42331 645 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 NR1H3Q13133 447 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 EML3Q32P44 896 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ZC3H12AQ5D1E8 599 aaKnown RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 BBS7Q8IWZ6 715 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ACRBPQ8NEB7 543 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 SLC35G2Q8TBE7 412 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 CSGALNACT1Q8TDX6 532 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 NTAN1Q96AB6 310 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 MSANTD3Q96H12 275 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ARHGEF38Q9NXL2 777 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 AGO1Q9UL18 857 aaKnown RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 WNT6Q9Y6F9 365 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 DOCK4Q8N1I0 1966 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 KCNU1A8MYU2 1149 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ACSL4O60488 711 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ADH1CP00326 375 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 KLKB1P03952 638 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 CCDC175P0C221 793 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 TFE3P19532 575 aaPredicted RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 MAN1A1P33908 653 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 MLLT6P55198 1093 aaPredicted RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 HDAC4P56524 1084 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 OGDHQ02218 1023 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 KIF5AQ12840 1032 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ADGRF1Q5T601 910 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 C1orf228Q6PIY5 440 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 TSGA10Q9BZW7 698 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 REXO2Q9Y3B8 237 aaKnown RBP19.42■□□□□ 0.7
PTPRK-218ENST00000525459 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 MYOFQ9NZM1 2061 aa19.42■□□□□ 0.7
PTPRK-218ENST00000525459 ARNTLO00327 626 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 PCK1P35558 622 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 AMPD2Q01433 879 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 ZNF252P-AS1Q0IIN9 211 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 ADAM33Q9BZ11 813 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 CALCOCO1Q9P1Z2 691 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 ADGRG1Q9Y653 693 aa19.41■□□□□ 0.7
PTPRK-218ENST00000525459 TYW5A2RUC4 315 aaKnown RBP19.4■□□□□ 0.7
PTPRK-218ENST00000525459 RUNX3Q13761 415 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 IFI16Q16666 785 aaKnown RBP19.4■□□□□ 0.7
PTPRK-218ENST00000525459 ITPRIPL2Q3MIP1 535 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 FAM131BQ86XD5 332 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 ST13P5Q8NFI4 369 aaPredicted RBP19.4■□□□□ 0.7
PTPRK-218ENST00000525459 WBP2Q969T9 261 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 ASIC4Q96FT7 647 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 HAPLN3Q96S86 360 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 TKTL2Q9H0I9 626 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 OSGEPQ9NPF4 335 aa19.4■□□□□ 0.7
PTPRK-218ENST00000525459 PROSCO94903 275 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 MOCS2O96007 188 aaPredicted RBP19.39■□□□□ 0.7
PTPRK-218ENST00000525459 CYBBP04839 570 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 GLULP15104 373 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 SCAPQ12770 1279 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 EXOC4Q96A65 974 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 DESI2Q9BSY9 194 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 TRIM7Q9C029 511 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 ECT2Q9H8V3 914 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 SPHK2Q9NRA0 654 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 MARK1Q9P0L2 795 aa19.39■□□□□ 0.7
PTPRK-218ENST00000525459 KRT86O43790 486 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 LRCH4O75427 683 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 TTC39BQ5VTQ0 682 aaPredicted RBP19.39■□□□□ 0.69
PTPRK-218ENST00000525459 PSTKQ8IV42 348 aaKnown RBP19.39■□□□□ 0.69
PTPRK-218ENST00000525459 ZNF557Q8N988 423 aaPredicted RBP19.39■□□□□ 0.69
PTPRK-218ENST00000525459 ZFYVE19Q96K21 471 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 C1orf74Q96LT6 269 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 NECAB3Q96P71 396 aaPredicted RBP19.39■□□□□ 0.69
PTPRK-218ENST00000525459 EBF3Q9H4W6 596 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 C8orf33Q9H7E9 229 aaPredicted RBP19.39■□□□□ 0.69
PTPRK-218ENST00000525459 HPS4Q9NQG7 708 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 WNT16Q9UBV4 365 aa19.39■□□□□ 0.69
PTPRK-218ENST00000525459 F5H5T6 163 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 PRPSAP2O60256 369 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 PAGE1O75459 146 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 CYP17A1P05093 508 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 SLC1A1P43005 524 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 NOP2P46087 812 aaKnown RBP19.38■□□□□ 0.69
PTPRK-218ENST00000525459 GAD2Q05329 585 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 MPPE1Q53F39 396 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 EFHC2Q5JST6 749 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 SH3PXD2AQ5TCZ1 1133 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 TRIM68Q6AZZ1 485 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 ZNF662Q6ZS27 426 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 SLFN11Q7Z7L1 901 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 CD320Q9NPF0 282 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 MUTYHQ9UIF7 546 aa19.38■□□□□ 0.69
PTPRK-218ENST00000525459 HOXC11O43248 304 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms