RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CYP4F11Q9HBI6 524 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RRN3Q9NYV6 651 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 SMARCAL1Q9NZC9 954 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 RCOR3Q9P2K3 495 aaPredicted RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 MTRF1LQ9UGC7 380 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 HMGXB4Q9UGU5 601 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 AMACRQ9UHK6 382 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CYTH4Q9UIA0 394 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 DRG1Q9Y295 367 aaKnown RBP7.37□□□□□ -1.23
VPS11-201ENST00000524454 NR2E1Q9Y466 385 aa7.37□□□□□ -1.23
VPS11-201ENST00000524454 CUL9Q8IWT3 2517 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 GOLGA8KD6RF30 607 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PRRG1O14668 218 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TTI1O43156 1089 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 HSF2BPO75031 334 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PPFIA2O75334 1257 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ENDOD1O94919 500 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ABLIM3O94929 683 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PDGFBP01127 241 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 ITGAVP06756 1048 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 NUDT17P0C025 328 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 RARAP10276 462 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ODC1P11926 461 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ITIH2P19823 946 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TYMPP19971 482 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 GPD1P21695 349 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 FSHRP23945 695 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ACAT1P24752 427 aaKnown RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 RFC1P35251 1148 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 CDKN2BP42772 138 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 CARSP49589 748 aaKnown RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 CALCOCO2Q13137 446 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ZNF211Q13398 564 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 TFDP2Q14188 446 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PTPRNQ16849 979 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TMEM31Q5JXX7 168 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PPP1R26Q5T8A7 1209 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 FAM102AQ5T9C2 384 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 EMC10Q5UCC4 262 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 WSCD1Q658N2 575 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 LYPD8Q6UX82 237 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 SPOCD1Q6ZMY3 1216 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 BBS12Q6ZW61 710 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS11-201ENST00000524454 STRADAQ7RTN6 431 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TTC30AQ86WT1 665 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 GPR65Q8IYL9 337 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 STKLD1Q8NE28 680 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 OR6B3Q8NGW1 331 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 CENPIQ92674 756 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 BTBD6Q96KE9 485 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 RUFY1Q96T51 708 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 RTP3Q9BQQ7 232 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ACBD6Q9BR61 282 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 MRPL45Q9BRJ2 306 aaKnown RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 C1QTNF1Q9BXJ1 281 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 DUSP16Q9BY84 665 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 OXCT2Q9BYC2 517 aaPredicted RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 TXLNGYQ9BZA5 131 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 TRIM7Q9C029 511 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 DCLK3Q9C098 648 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 WDR6Q9NNW5 1121 aaKnown RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 ZDHHC18Q9NUE0 388 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 ZDHHC7Q9NXF8 308 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 PSD3Q9NYI0 1048 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 DNMT3BQ9UBC3 853 aaKnown RBP7.36□□□□□ -1.23
VPS11-201ENST00000524454 CDH9Q9ULB4 789 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 NFU1Q9UMS0 254 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 INSL5Q9Y5Q6 135 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 KMT2EQ8IZD2 1858 aa7.36□□□□□ -1.23
VPS11-201ENST00000524454 BDP1A6H8Y1 2624 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 OBSL1O75147 1896 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 C3orf70A6NLC5 250 aaPredicted RBP7.35□□□□□ -1.23
VPS11-201ENST00000524454 E5RJQ4 531 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 F8VP50 259 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 APOC4-APOC2K7ER74 178 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 NARSO43776 548 aaKnown RBP7.35□□□□□ -1.23
VPS11-201ENST00000524454 CALCAP01258 141 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 APOC2P02655 101 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 LRG1P02750 347 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 KRT1P04264 644 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 HNRNPA1P09651 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS11-201ENST00000524454 RALAP11233 206 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 ALADP13716 330 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 ZFXP17010 805 aaPredicted RBP7.35□□□□□ -1.23
VPS11-201ENST00000524454 GJA1P17302 382 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 NPR3P17342 541 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 CEBPBP17676 345 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 SDC4P31431 198 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 ELF1P32519 619 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 CCR2P41597 374 aa7.35□□□□□ -1.23
VPS11-201ENST00000524454 TAS2R40P59535 323 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms