RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 COPAP53621 1224 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 ATXN3P54252 364 aaPredicted RBP19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 DAOAP59103 153 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 MPPE1Q53F39 396 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 PMF1Q6P1K2 205 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 TMEM270Q6UE05 265 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 RABEPKQ7Z6M1 372 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 TMPRSS6Q8IU80 811 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 SCML4Q8N228 414 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 MINDY1Q8N5J2 469 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 LMO3Q8TAP4 145 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 RNF139Q8WU17 664 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 SLC35F5Q8WV83 523 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 UCMAQ8WVF2 138 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 TOE1Q96GM8 510 aaKnown RBP19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 CIPCQ9C0C6 399 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 METTL14Q9HCE5 456 aaKnown RBP19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 STOML2Q9UJZ1 356 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 MAN1B1Q9UKM7 699 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 KIAA1257Q9ULG3 409 aa19.62■□□□□ 0.73
PTP4A3-206ENST00000524028 ASCC3Q8N3C0 2202 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 SPAARA0A1B0GVQ0 90 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 PIK3R2O00459 728 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 NCAM1P13591 858 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 BMP6P22004 513 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 HARS2P49590 506 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 RGS7P49802 495 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 TPMTP51580 245 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 EIF4HQ15056 248 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 RGL4Q8IZJ4 473 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 SIX6OS1Q8N1H7 587 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 DHTKD1Q96HY7 919 aaPredicted RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 CEP63Q96MT8 703 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 TMEM121BQ9BXQ6 578 aaPredicted RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 GTPBP4Q9BZE4 634 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 SLC32A1Q9H598 525 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 CNGB3Q9NQW8 809 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 ABCC13Q9NSE7 274 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 PCDHB4Q9Y5E5 795 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 PCDH15Q96QU1 1955 aa19.61■□□□□ 0.73
PTP4A3-206ENST00000524028 PSMA7O14818 248 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 PMM2O15305 246 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 SYNCRIPO60506 623 aaKnown RBP19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 PROS1P07225 676 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 PAEPP09466 180 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 CD59P13987 128 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 HLA-FP30511 346 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 SGSHP51688 502 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 FAM193AP78312 1265 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 SYCP2LQ5T4T6 812 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 TTI2Q6NXR4 508 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 HDDC3Q8N4P3 179 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 CLEC4CQ8WTT0 213 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 FOXJ1Q92949 421 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 SIPA1Q96FS4 1042 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 NT5C1BQ96P26 610 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 SCNM1Q9BWG6 230 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 GPR174Q9BXC1 333 aa19.6■□□□□ 0.73
PTP4A3-206ENST00000524028 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.6■□□□□ 0.737e-6■■□□□ 11.9
PTP4A3-206ENST00000524028 GOLGA6L7A0A1B0GV03 622 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 PPP1R3GB7ZBB8 358 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 TIMM44O43615 452 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 OPHN1O60890 802 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 EPHX1P07099 455 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 HLA-EP13747 358 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 BRD2P25440 801 aaKnown RBP19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 CNGA2Q16280 664 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 PLEKHG6Q3KR16 790 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 CCDC40Q4G0X9 1142 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 ADGRF1Q5T601 910 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 UNQ6494/PRO21346Q6UXR6 183 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 RRAGAQ7L523 313 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 CACUL1Q86Y37 369 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 ARHGEF19Q8IW93 802 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 PPM1KQ8N3J5 372 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 DNASE2BQ8WZ79 361 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 TMA16Q96EY4 203 aaKnown RBP19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 DNAAF2Q9NVR5 837 aaKnown RBP19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 HOOK1Q9UJC3 728 aaKnown RBP19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 CEP192Q8TEP8 1941 aa19.59■□□□□ 0.73
PTP4A3-206ENST00000524028 PI4KAP42356 2102 aa19.58■□□□□ 0.73
PTP4A3-206ENST00000524028 GJB3O75712 270 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 LATS1O95835 1130 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 IGLV3-19P01714 112 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 IGLV3-27P01718 113 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 SYPP08247 313 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 NUCB2P80303 420 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 SIM1P81133 766 aaPredicted RBP19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 STIM1Q13586 685 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 WDR45BQ5MNZ6 344 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 KLHL10Q6JEL2 608 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 MSANTD2Q6P1R3 559 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 SERPINA13PQ6UXR4 307 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 KIAA0907Q7Z7F0 614 aaPredicted RBP19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 ADIPOR2Q86V24 386 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 ELOA2Q8IYF1 753 aaPredicted RBP19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 CADM4Q8NFZ8 388 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 WFDC5Q8TCV5 224 aa19.58■□□□□ 0.72
PTP4A3-206ENST00000524028 CYB5D2Q8WUJ1 264 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms