RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RRN3Q9NYV6 651 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.58□□□□□ -1.523e-23■■■■■ 27.9
PABPC1-223ENST00000523636 ADGRE2Q9UHX3 823 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 ACSL6Q9UKU0 697 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 DDX19BQ9UMR2 479 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 GPR52Q9Y2T5 361 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 TAF6LQ9Y6J9 622 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 IKBKGQ9Y6K9 419 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 SQORQ9Y6N5 450 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 CEP192Q8TEP8 1941 aa5.58□□□□□ -1.52
PABPC1-223ENST00000523636 TRIM64A6NGJ6 449 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TRIM64BA6NI03 449 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 NOTOA8MTQ0 251 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 H7BY64 318 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CPLX1O14810 134 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 AKAP3O75969 853 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 GGPS1O95749 300 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CCDC192P0DO97 292 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 LCP1P13796 627 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ENGP17813 658 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 KLRC2P26717 231 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TNFRSF8P28908 595 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CTNNA1P35221 906 aaKnown RBP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 AFMP43652 599 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 POLGP54098 1239 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 MPP1Q00013 466 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TLE3Q04726 772 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SLC9A5Q14940 896 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 RILPL1Q5EBL4 403 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TANGO2Q6ICL3 276 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 KLHL10Q6JEL2 608 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CNNM4Q6P4Q7 775 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 C16orf87Q6PH81 154 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 UNC5DQ6UXZ4 953 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SPOCD1Q6ZMY3 1216 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SLC24A5Q71RS6 500 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CBLL1Q75N03 491 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 BRAPQ7Z569 592 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 FAM160B2Q86V87 743 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ERC1Q8IUD2 1116 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ABI1Q8IZP0 508 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TEX9Q8N6V9 391 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 OR2I1PQ8NGU4 316 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 COG1Q8WTW3 980 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 LEO1Q8WVC0 666 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CLIP3Q96DZ5 547 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 IGSF21Q96ID5 467 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SLX1AQ9BQ83 275 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 CRTAC1Q9NQ79 661 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ANLNQ9NQW6 1124 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TBC1D22BQ9NU19 505 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TMEM74BQ9NUR3 256 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TMEM161AQ9NX61 479 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 MTMR4Q9NYA4 1195 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 FNIP2Q9P278 1114 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SEL1LQ9UBV2 794 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 TRAF6Q9Y4K3 522 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ZFP37Q9Y6Q3 630 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-223ENST00000523636 ITIH6Q6UXX5 1313 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PRRC2CQ9Y520 2896 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 FAM149AA5PLN7 773 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ERICH4A6NGS2 130 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TSPY2A6NKD2 308 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 H0Y3Z8 333 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 M0R3H8 397 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 MAN2B1O00754 1011 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 WNT9AO14904 365 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TEX28O15482 410 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TLR5O60602 858 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ASLP04424 464 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CHGBP05060 677 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TSPY3P0CV98 308 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TSPY8P0CW00 308 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 HOXD12P35452 270 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 AK2P54819 239 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CXADRP78310 365 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PLIN5Q00G26 463 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TSPY1Q01534 308 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 GIT2Q14161 759 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TRIP6Q15654 476 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ARHGAP29Q52LW3 1261 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 GPATCH4Q5T3I0 446 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 INTS11Q5TA45 600 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 SPATA1Q5VX52 437 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PMS2CLQ68D20 193 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 FAAH2Q6GMR7 532 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TAF2Q6P1X5 1199 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 MTSS1LQ765P7 747 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 EPM2AIP1Q7L775 607 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 MILR1Q7Z6M3 343 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ATG4DQ86TL0 474 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 MTDHQ86UE4 582 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 NLRX1Q86UT6 975 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 LRRTM3Q86VH5 581 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 SPATS2Q86XZ4 545 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms