RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 GUCD1Q96NT3 240 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 TASP1Q9H6P5 420 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLK4-210ENST00000522136 ARHGEF38Q9NXL2 777 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 LRRD1A4D1F6 860 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 KCNU1A8MYU2 1149 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 STC2O76061 302 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 FSHRP23945 695 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 CDH6P55285 790 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 PPP2R5DQ14738 602 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 BRMS1LQ5PSV4 323 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 KCTD6Q8NC69 237 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 PPM1EQ8WY54 764 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 KCTD15Q96SI1 283 aaPredicted RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 SIK2Q9H0K1 926 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 C3orf70A6NLC5 250 aaPredicted RBP13.88□□□□□ -0.19
CLK4-210ENST00000522136 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 CEP104O60308 925 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 PAGE1O75459 146 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLK4-210ENST00000522136 KLKB1P03952 638 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 KDELR1P24390 212 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 L1CAMP32004 1257 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 ARSEP51690 589 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 COG7P83436 770 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 RING1Q06587 406 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 NNTQ13423 1086 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 PPP6R3Q5H9R7 873 aaPredicted RBP13.88□□□□□ -0.19
CLK4-210ENST00000522136 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 MFSD7Q6UXD7 560 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 NTAN1Q96AB6 310 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 CCL26Q9Y258 94 aa13.88□□□□□ -0.19
CLK4-210ENST00000522136 HELZP42694 1942 aaKnown RBP13.88□□□□□ -0.19
CLK4-210ENST00000522136 H3BQ06 376 aaPredicted RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 APOEP02649 317 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 KPNA1P52294 538 aaPredicted RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 SLC7A9P82251 487 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ITIH3Q06033 890 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ARL13BQ3SXY8 428 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 EFHC2Q5JST6 749 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ATAT1Q5SQI0 421 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 GET4Q7L5D6 327 aaPredicted RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 CCDC50Q8IVM0 306 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ST13P5Q8NFI4 369 aaPredicted RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 HERPUD2Q9BSE4 406 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CLUHO75153 1309 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 GOLGA6L7A0A1B0GV03 622 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 PRAMEF12O95522 483 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 SLC2A3P11169 496 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 KRT10P13645 584 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 PRLRP16471 622 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 DDX6P26196 483 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLK4-210ENST00000522136 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 AVPR1AP37288 418 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 SCAPQ12770 1279 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 KRT81Q14533 505 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ODF2Q5BJF6 829 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 KAZNQ674X7 775 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 GPR153Q6NV75 609 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 SPOCD1Q6ZMY3 1216 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 DENND1CQ8IV53 801 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 ATP6V0D2Q8N8Y2 350 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 RIN3Q8TB24 985 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 FGF13Q92913 245 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 USP13Q92995 863 aaPredicted RBP13.87□□□□□ -0.19
CLK4-210ENST00000522136 PBKQ96KB5 322 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CALN1Q9BXU9 219 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CARD9Q9H257 536 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 HS3ST4Q9Y661 456 aa13.87□□□□□ -0.19
CLK4-210ENST00000522136 CREB3O43889 395 aa13.86□□□□□ -0.19
CLK4-210ENST00000522136 FOSL2P15408 326 aa13.86□□□□□ -0.19
CLK4-210ENST00000522136 IL4RP24394 825 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms