RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZNF445P59923 1031 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 SPEM2Q0P670 501 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 NNTQ13423 1086 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 FAM133BQ5BKY9 247 aaKnown RBP18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 FKBP15Q5T1M5 1219 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 CHPFQ8IZ52 775 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 GPR161Q8N6U8 529 aaKnown RBP18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 TRIM62Q9BVG3 475 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 HSD3B7Q9H2F3 369 aa18.6■□□□□ 0.57
TRAPPC9-211ENST00000521700 A0A1W2PQF6 199 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 TCRBV21S2A2A0A5A6 115 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 LRRC10BA6NIK2 292 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 F8VZ95 297 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 ERBB2P04626 1255 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 HOXB2P14652 356 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 ZNF18P17022 549 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 SLC6A4P31645 630 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 SGSHP51688 502 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 PITX1P78337 314 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 PLK5Q496M5 336 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 PTPN20Q4JDL3 420 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 USP39Q53GS9 565 aaKnown RBP18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 PIK3R6Q5UE93 754 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 NADSYN1Q6IA69 706 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 OR6B2Q6IFH4 312 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 SDE2Q6IQ49 451 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 RFWD3Q6PCD5 774 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 FAM183BPQ6ZVS7 135 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 OLIG1Q8TAK6 271 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 HMGB4Q8WW32 186 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 DDX1Q92499 740 aaKnown RBP18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 LOXL4Q96JB6 756 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 DUSP15Q9H1R2 295 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 ASNSD1Q9NWL6 643 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 CACNA2D2Q9NY47 1150 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 SIK3Q9Y2K2 1263 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 FRYLO94915 3013 aa18.59■□□□□ 0.57
TRAPPC9-211ENST00000521700 WASH3PC4AMC7 463 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 EPHB6O15197 1021 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 TRUB2O95900 331 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 IGLV3-25P01717 112 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 GLI1P08151 1106 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 CDH5P33151 784 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 POLR2FP61218 127 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 EIF4EBP2Q13542 120 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 DCAF6Q58WW2 860 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 EFHC1Q5JVL4 640 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 TMEM215Q68D42 235 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 ANKS1BQ7Z6G8 1248 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 NOP9Q86U38 636 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 DEFB106AQ8N104 65 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 TMEM35BQ8NCS4 154 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 ANKRD20A12PQ8NF67 263 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 SLC2A13Q96QE2 648 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 GABRG3Q99928 467 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 CD248Q9HCU0 757 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 ELOVL2Q9NXB9 296 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 BCCIPQ9P287 314 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 USP18Q9UMW8 372 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 CEP83Q9Y592 693 aa18.58■□□□□ 0.56
TRAPPC9-211ENST00000521700 RALGAPA1Q6GYQ0 2036 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 SPTBN4Q9H254 2564 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 IRAK2O43187 625 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 LRP3O75074 770 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 GRAP2O75791 330 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 GABRG2P18507 467 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 CDK11BP21127 795 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 HLA-FP30511 346 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 SNX16P57768 344 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 SLC6A3Q01959 620 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 SYCP1Q15431 976 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 MPP7Q5T2T1 576 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 TAF3Q5VWG9 929 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 KIAA1211LQ6NV74 962 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 CAVIN1Q6NZI2 390 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 OLFML1Q6UWY5 402 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 APTXQ7Z2E3 356 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 ABCA7Q8IZY2 2146 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 PGBD3Q8N328 593 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 AOPEPQ8N6M6 819 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 IPO4Q8TEX9 1081 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 RLN3Q8WXF3 142 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 ERLEC1Q96DZ1 483 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 MYEOVQ96EZ4 313 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 ARRDC1-AS1Q9H2J1 176 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 THAP10Q9P2Z0 257 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 RAD54BQ9Y620 910 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 STON1Q9Y6Q2 735 aa18.57■□□□□ 0.56
TRAPPC9-211ENST00000521700 LGALS16A8MUM7 142 aa18.56■□□□□ 0.56
TRAPPC9-211ENST00000521700 TBL1XO60907 577 aa18.56■□□□□ 0.56
TRAPPC9-211ENST00000521700 HSF2BPO75031 334 aa18.56■□□□□ 0.56
TRAPPC9-211ENST00000521700 GFPT2O94808 682 aa18.56■□□□□ 0.56
TRAPPC9-211ENST00000521700 RHOBTB1O94844 696 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms