RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SOX9P48436 509 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 AIF1P55008 147 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 SLC12A1Q13621 1099 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 GRAMD4Q6IC98 578 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 ACAD10Q6JQN1 1059 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 TAC4Q86UU9 113 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 TMEM25Q86YD3 366 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 ATP6V0D2Q8N8Y2 350 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
CLK4-209ENST00000521621 NLRC4Q9NPP4 1024 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 ZSCAN32Q9NX65 697 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 DEC1Q9P2X7 70 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 NAALADL1Q9UQQ1 740 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 K7ESF4 209 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 LAMTOR5O43504 91 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 EGFP01133 1207 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 PNMA6AP0CW24 399 aaPredicted RBP9.84□□□□□ -0.83
CLK4-209ENST00000521621 MYBL1P10243 752 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 MTAPQ13126 283 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 FAM133BQ5BKY9 247 aaKnown RBP9.84□□□□□ -0.83
CLK4-209ENST00000521621 OTUD1Q5VV17 481 aaPredicted RBP9.84□□□□□ -0.83
CLK4-209ENST00000521621 ZC3H14Q6PJT7 736 aaKnown RBP9.84□□□□□ -0.83
CLK4-209ENST00000521621 STRADAQ7RTN6 431 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 TERB1Q8NA31 727 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 C3orf20Q8ND61 904 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 SLC20A1Q8WUM9 679 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 EDEM1Q92611 657 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 PCDHB18PQ96TA0 734 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 GABRG3Q99928 467 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 NCAPGQ9BPX3 1015 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 ST7Q9NRC1 585 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 SLC12A6Q9UHW9 1150 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 NENFQ9UMX5 172 aa9.84□□□□□ -0.83
CLK4-209ENST00000521621 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 SIGLEC16A6NMB1 481 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 MDM4O15151 490 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 TULP3O75386 442 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 KAT7O95251 611 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 APOEP02649 317 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 DCNP07585 359 aaKnown RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 TYRP14679 529 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 CCR1P32246 355 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 CXCL12P48061 93 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 PLK1P53350 603 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 GAS6Q14393 721 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 ASIC2Q16515 512 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 PIK3R6Q5UE93 754 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 SYPL2Q5VXT5 272 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 C11orf74Q86VG3 221 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 MIB1Q86YT6 1006 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 DEFB106AQ8N104 65 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 HJURPQ8NCD3 748 aaPredicted RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 ST13P5Q8NFI4 369 aaPredicted RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 NDRG1Q92597 394 aaKnown RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 HAPLN3Q96S86 360 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 ISCUQ9H1K1 167 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 LCMT1Q9UIC8 334 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 MMP17Q9ULZ9 603 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 CAPN9O14815 690 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 NSFP46459 744 aaKnown RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 NHLH1Q02575 133 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 MS4A13Q5J8X5 152 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 EOGTQ5NDL2 527 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 OR6B2Q6IFH4 312 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 CHST9Q7L1S5 443 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 RASSF3Q86WH2 238 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 DENND1CQ8IV53 801 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 FIBINQ8TAL6 211 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 FNIP1Q8TF40 1166 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 DNAJC7Q99615 494 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 BBS2Q9BXC9 721 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 PDCL3Q9H2J4 239 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 FBRSQ9HAH7 460 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 SPATA6Q9NWH7 488 aaPredicted RBP9.83□□□□□ -0.84
CLK4-209ENST00000521621 SFMBT1Q9UHJ3 866 aa9.83□□□□□ -0.84
CLK4-209ENST00000521621 IGLV3-10A0A075B6K4 115 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 EIF3CLB5ME19 914 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 SERPING1P05155 500 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 HOXD9P28356 352 aaPredicted RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 HTR7P34969 479 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 NAA35Q5VZE5 725 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 HGSNATQ68CP4 663 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 NADSYN1Q6IA69 706 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 LONP2Q86WA8 852 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 C12orf40Q86WS4 652 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 PASD1Q8IV76 773 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 NTAN1Q96AB6 310 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 EIF3CQ99613 913 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 EPC1Q9H2F5 836 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 SYNCQ9H7C4 482 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 FBRSL1Q9HCM7 1045 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 CD248Q9HCU0 757 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 TJP2Q9UDY2 1190 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 NDRG2Q9UN36 371 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 C2CD4BA6NLJ0 364 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms