RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GBP4Q96PP9 640 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 RTKNQ9BST9 563 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 THAP10Q9P2Z0 257 aaPredicted RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 AJAP1Q9UKB5 411 aaPredicted RBP17.76■□□□□ 0.43
SQLE-205ENST00000521232 PCDHGC3Q9UN70 934 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 NAALADL1Q9UQQ1 740 aa17.76■□□□□ 0.43
SQLE-205ENST00000521232 SPTBN2O15020 2390 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 WASH3PC4AMC7 463 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 E5RJQ4 531 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 FOXN3O00409 490 aaPredicted RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 TIMM44O43615 452 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 GDF9O60383 454 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 TSPAN3O60637 253 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 CLCN1P35523 988 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 SLC11A2P49281 568 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 PTK2Q05397 1052 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 KCNMA1Q12791 1236 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 NNTQ13423 1086 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 ENPP2Q13822 863 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 E2F5Q15329 346 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 HSP90AA4PQ58FG1 418 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 MPP7Q5T2T1 576 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 KIAA1211LQ6NV74 962 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 ANKS1BQ7Z6G8 1248 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 FRMD1Q8N878 549 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 ENOX1Q8TC92 643 aaKnown RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 DQX1Q8TE96 717 aaKnown RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 UCMAQ8WVF2 138 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 FAM149B1Q96BN6 582 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 SLC39A13Q96H72 371 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 SPACA7Q96KW9 195 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 SERPINB11Q96P15 392 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 TRIM62Q9BVG3 475 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 ELOVL2Q9NXB9 296 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 CACNA2D2Q9NY47 1150 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 MBD1Q9UIS9 605 aaPredicted RBP17.75■□□□□ 0.43
SQLE-205ENST00000521232 TLR6Q9Y2C9 796 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 STON1Q9Y6Q2 735 aa17.75■□□□□ 0.43
SQLE-205ENST00000521232 KCNJ18B7U540 433 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 SLC30A4O14863 429 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 ZBTB24O43167 697 aaPredicted RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 IRAK2O43187 625 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 ACSL4O60488 711 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 CAVIN2O95810 425 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 EEF1GP26641 437 aaKnown RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 CREB5Q02930 508 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 PDCLQ13371 301 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 KCNJ12Q14500 433 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 EIF4HQ15056 248 aaKnown RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 FAM133BQ5BKY9 247 aaKnown RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 TCP11X2Q5H9J9 407 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 SPDYCQ5MJ68 293 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 PIK3R6Q5UE93 754 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 SYPL2Q5VXT5 272 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 TMEM215Q68D42 235 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 RNF43Q68DV7 783 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 FAM71AQ8IYT1 594 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 C12orf50Q8NA57 414 aaPredicted RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 FCRL2Q96LA5 508 aaPredicted RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 POPDC2Q9HBU9 364 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 RAD54BQ9Y620 910 aa17.74■□□□□ 0.43
SQLE-205ENST00000521232 CNOT1A5YKK6 2376 aaKnown RBP17.74■□□□□ 0.43
SQLE-205ENST00000521232 GOLGA6L7A0A1B0GV03 622 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 CAPN9O14815 690 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 MAP3K13O43283 966 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 NDUFV2P19404 249 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 LIMK1P53667 647 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 LPCAT2Q7L5N7 544 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 KIAA0907Q7Z7F0 614 aaPredicted RBP17.73■□□□□ 0.43
SQLE-205ENST00000521232 PPP1R13BQ96KQ4 1090 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 SMOC1Q9H4F8 434 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 CALCOCO1Q9P1Z2 691 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 NFE2L3Q9Y4A8 694 aa17.73■□□□□ 0.43
SQLE-205ENST00000521232 CEP192Q8TEP8 1941 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 PI4KAP42356 2102 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 ZNF217O75362 1048 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 IGLV3-25P01717 112 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 GLI1P08151 1106 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 HLA-FP30511 346 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 SLC6A4P31645 630 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 KRT9P35527 623 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 IL12RB1P42701 662 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 SGSHP51688 502 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 BPIFB4P59827 614 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 EIF4EBP2Q13542 120 aaPredicted RBP17.72■□□□□ 0.43
SQLE-205ENST00000521232 AASDHQ4L235 1098 aaPredicted RBP17.72■□□□□ 0.43
SQLE-205ENST00000521232 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 NADSYN1Q6IA69 706 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 RFWD3Q6PCD5 774 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 TAC4Q86UU9 113 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 SLC47A2Q86VL8 602 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
SQLE-205ENST00000521232 ADAM32Q8TC27 787 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 MRGPRX1Q96LB2 322 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms