RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 IP6K2Q9UHH9 426 aa15.93■□□□□ 0.14
LSM1-203ENST00000520755 LSM7Q9UK45 103 aaKnown RBP15.93■□□□□ 0.14
LSM1-203ENST00000520755 STAP1Q9ULZ2 295 aa15.93■□□□□ 0.14
LSM1-203ENST00000520755 DUSP12Q9UNI6 340 aa15.93■□□□□ 0.14
LSM1-203ENST00000520755 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
LSM1-203ENST00000520755 WNT6Q9Y6F9 365 aa15.93■□□□□ 0.14
LSM1-203ENST00000520755 COL4A2P08572 1712 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 SYNJ2BP-COX16A0A087WUM0 186 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 I6L893 689 aaPredicted RBP15.92■□□□□ 0.14
LSM1-203ENST00000520755 M0QYT0 321 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 MYO1FO00160 1098 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 PALMO75781 387 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 STC2O76061 302 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 IGLV3-27P01718 113 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 SRFP11831 508 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 IFNAR2P48551 515 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 PIGHQ14442 188 aaPredicted RBP15.92■□□□□ 0.14
LSM1-203ENST00000520755 STRADAQ7RTN6 431 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 SLFN11Q7Z7L1 901 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 ZSCAN30Q86W11 494 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 ASIC4Q96FT7 647 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 SERPINB11Q96P15 392 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 COL25A1Q9BXS0 654 aaPredicted RBP15.92■□□□□ 0.14
LSM1-203ENST00000520755 ANLNQ9NQW6 1124 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 DUS2Q9NX74 493 aaKnown RBP15.92■□□□□ 0.14
LSM1-203ENST00000520755 RRN3Q9NYV6 651 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 COX16Q9P0S2 106 aa15.92■□□□□ 0.14
LSM1-203ENST00000520755 HBS1LQ9Y450 684 aaKnown RBP15.92■□□□□ 0.14
LSM1-203ENST00000520755 E2F8A0AVK6 867 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 GOLGA6L9A6NEM1 432 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 FANCGO15287 622 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 CHADO15335 359 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 COMTP21964 271 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 RDXP35241 583 aaKnown RBP15.91■□□□□ 0.14
LSM1-203ENST00000520755 TAS2R40P59535 323 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 SLC25A11Q02978 314 aaKnown RBP15.91■□□□□ 0.14
LSM1-203ENST00000520755 NNTQ13423 1086 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 TRIP4Q15650 581 aaPredicted RBP15.91■□□□□ 0.14
LSM1-203ENST00000520755 TRIM68Q6AZZ1 485 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 TXNRD3NBQ6F5E7 133 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 OSCP1Q8WVF1 389 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 IRF7Q92985 503 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 PLD4Q96BZ4 506 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 SLC39A13Q96H72 371 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 FCRL2Q96LA5 508 aaPredicted RBP15.91■□□□□ 0.14
LSM1-203ENST00000520755 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 ALG6Q9Y672 507 aa15.91■□□□□ 0.14
LSM1-203ENST00000520755 MIA3Q5JRA6 1907 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 MYOFQ9NZM1 2061 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 DCXO43602 365 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 FTCDO95954 541 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 ARSAP15289 507 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 IL1R2P27930 398 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 CORO1AP31146 461 aaKnown RBP15.9■□□□□ 0.14
LSM1-203ENST00000520755 MARCKSL1P49006 195 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 KPNA1P52294 538 aaPredicted RBP15.9■□□□□ 0.14
LSM1-203ENST00000520755 NAP1L1P55209 391 aaKnown RBP15.9■□□□□ 0.14
LSM1-203ENST00000520755 TBX4P57082 545 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 DEUP1Q05D60 604 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 TNK2Q07912 1038 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 NME3Q13232 169 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 DAAM2Q86T65 1068 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 FAM131BQ86XD5 332 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 BBS7Q8IWZ6 715 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 UBALD2Q8IYN6 164 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 CCDC185Q8N715 623 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 TTC8Q8TAM2 541 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 CSGALNACT1Q8TDX6 532 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 CD101Q93033 1021 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 CALR3Q96L12 384 aaKnown RBP15.9■□□□□ 0.14
LSM1-203ENST00000520755 LINC00597Q9H2U6 94 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 EBF3Q9H4W6 596 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 SLC2A4RGQ9NR83 387 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 TMPRSS4Q9NRS4 437 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 TLR6Q9Y2C9 796 aa15.9■□□□□ 0.14
LSM1-203ENST00000520755 KIAA1549LQ6ZVL6 1849 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 A0A0C4DFX4 3053 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 SLC9A3R1O14745 358 aaPredicted RBP15.89■□□□□ 0.13
LSM1-203ENST00000520755 GREM1O60565 184 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 KLKB1P03952 638 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 MIPP30301 263 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 GBP1P32455 592 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 PCK1P35558 622 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 HARS2P49590 506 aaKnown RBP15.89■□□□□ 0.13
LSM1-203ENST00000520755 CXCR3P49682 368 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 ZXDAP98168 799 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 PFKPQ01813 784 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 ACAP1Q15027 740 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 PDGFRLQ15198 375 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 IFI16Q16666 785 aaKnown RBP15.89■□□□□ 0.13
LSM1-203ENST00000520755 EML3Q32P44 896 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 NYAP1Q6ZVC0 841 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 HTR3DQ70Z44 454 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 DENND1CQ8IV53 801 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 SLC35F6Q8N357 371 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 RNF34Q969K3 372 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 FAM83CQ9BQN1 747 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 DCLK3Q9C098 648 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 GTSE1Q9NYZ3 720 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms