RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 SNF8Q96H20 258 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 FMO2Q99518 471 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 HTATIP2Q9BUP3 242 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TRIM31Q9BZY9 425 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 UBE2OQ9C0C9 1292 aaKnown RBP16.62■□□□□ 0.25
SNHG6-201ENST00000520348 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
SNHG6-201ENST00000520348 ZNF148Q9UQR1 794 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TLR6Q9Y2C9 796 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
SNHG6-201ENST00000520348 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 STIP1P31948 543 aaKnown RBP16.61■□□□□ 0.25
SNHG6-201ENST00000520348 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
SNHG6-201ENST00000520348 MTMR3Q13615 1198 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 GLIS1Q8NBF1 620 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 PDZD8Q8NEN9 1154 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 FCRL2Q96LA5 508 aaPredicted RBP16.61■□□□□ 0.25
SNHG6-201ENST00000520348 TKTL2Q9H0I9 626 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 USP29Q9HBJ7 922 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
SNHG6-201ENST00000520348 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 ASIC3Q9UHC3 531 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 HPCAL4Q9UM19 191 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 IRAK3Q9Y616 596 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 RAD54BQ9Y620 910 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 SLC4A7Q9Y6M7 1214 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
SNHG6-201ENST00000520348 FAM72CH0Y354 149 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 EEF2KO00418 725 aaKnown RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 C2CD2LO14523 706 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 NDC80O14777 642 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 TEX28O15482 410 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 PPFIA2O75334 1257 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 CSH1P0DML2 217 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 CSH2P0DML3 217 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 RARGP13631 454 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 ATP2A2P16615 1042 aaKnown RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 AMPD1P23109 780 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 CCR1P32246 355 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 GBE1Q04446 702 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 SLC10A2Q12908 348 aaPredicted RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 TRIP4Q15650 581 aaPredicted RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 KCTD19Q17RG1 926 aaPredicted RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 FAM72AQ5TYM5 149 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 FAM72DQ6L9T8 149 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 KLHDC10Q6PID8 442 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 TMC3Q7Z5M5 1100 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 FAM72BQ86X60 149 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 GPR152Q8TDT2 470 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 QKIQ96PU8 341 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 CDK5RAP1Q96SZ6 601 aaKnown RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 FOXP3Q9BZS1 431 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
SNHG6-201ENST00000520348 ETNK2Q9NVF9 386 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 DTLQ9NZJ0 730 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 RWDD3Q9Y3V2 267 aa16.6■□□□□ 0.25
SNHG6-201ENST00000520348 HACD1B0YJ81 288 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 C5orf67F2Z3F1 127 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 DNALI1O14645 258 aaPredicted RBP16.59■□□□□ 0.25
SNHG6-201ENST00000520348 ZNF189O75820 626 aaPredicted RBP16.59■□□□□ 0.25
SNHG6-201ENST00000520348 SLC2A3P11169 496 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 BMPR1AP36894 532 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
SNHG6-201ENST00000520348 TUBP50607 506 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 GDF10P55107 478 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 RING1Q06587 406 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 CALCOCO2Q13137 446 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 MTA1Q13330 715 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 SLC45A4Q5BKX6 768 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
SNHG6-201ENST00000520348 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 CDKL3Q8IVW4 592 aaPredicted RBP16.59■□□□□ 0.25
SNHG6-201ENST00000520348 UNC45BQ8IWX7 931 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 KLHL23Q8NBE8 558 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 LRRC45Q96CN5 670 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 EPAS1Q99814 870 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 ADAM7Q9H2U9 754 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 SFMBT1Q9UHJ3 866 aa16.59■□□□□ 0.25
SNHG6-201ENST00000520348 LCHNA4D1U4 455 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 MSI1O43347 362 aaKnown RBP16.58■□□□□ 0.24
SNHG6-201ENST00000520348 MFSD11O43934 449 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 PAGE1O75459 146 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 LRIG2O94898 1065 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 C1RP00736 705 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 ERCC2P18074 760 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 PLTPP55058 493 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 TPI1P60174 286 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 UBE3AQ05086 875 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 CBLBQ13191 982 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 PRKD1Q15139 912 aaPredicted RBP16.58■□□□□ 0.24
SNHG6-201ENST00000520348 ACBD5Q5T8D3 534 aaPredicted RBP16.58■□□□□ 0.24
SNHG6-201ENST00000520348 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 BZW1Q7L1Q6 419 aaKnown RBP16.58■□□□□ 0.24
SNHG6-201ENST00000520348 GSTA5Q7RTV2 222 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 RELL1Q8IUW5 271 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 ZNF683Q8IZ20 524 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 GIPC2Q8TF65 315 aa16.58■□□□□ 0.24
SNHG6-201ENST00000520348 C1orf74Q96LT6 269 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms