RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 GPRIN1Q7Z2K8 1008 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 PIGWQ7Z7B1 504 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 CCDC33Q8N5R6 958 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 CCNYQ8ND76 341 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 ZMIZ2Q8NF64 920 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 URGCPQ8TCY9 931 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 GLT1D1Q96MS3 346 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 SPATA13Q96N96 652 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 OLFM3Q96PB7 478 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 DHRS4Q9BTZ2 278 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 CSNK1G1Q9HCP0 422 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 SSU72Q9NP77 194 aaKnown RBP8.71□□□□□ -1.02
HMGB4-203ENST00000519684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGB4-203ENST00000519684 SRRDQ9UH36 339 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 TCRBV9S1A1TA0A576 114 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 HHLA1C9JL84 531 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 M0QZQ0 153 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 TRIM66O15016 1216 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 OPHN1O60890 802 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 AOC2O75106 756 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 AVILO75366 819 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ZWINTO95229 277 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 METTL18O95568 372 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 MT-ND3P03897 115 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 BDNFP23560 247 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 LIG3P49916 1009 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF135P52742 658 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SCAPQ12770 1279 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SEMA5AQ13591 1074 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PRKD1Q15139 912 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ANKRD20A2Q5SQ80 823 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ANKRD20A1Q5TYW2 823 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ANKRD20A3Q5VUR7 823 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 FAM171BQ6P995 826 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 DENND5BQ6ZUT9 1274 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 IGDCC3Q8IVU1 814 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RAET1EQ8TD07 263 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 DCAKDQ8WVC6 231 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PGAP3Q96FM1 320 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RTP3Q9BQQ7 232 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RHOBTB2Q9BYZ6 727 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ACTR5Q9H9F9 607 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 FGFR1OP2Q9NVK5 253 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 FBXW11Q9UKB1 542 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 MFHAS1Q9Y4C4 1052 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RAD54BQ9Y620 910 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 MAD1L1Q9Y6D9 718 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 FRMPD3Q5JV73 1810 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 A0A1W2PPM1 405 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RNF103O00237 685 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 TRDMT1O14717 391 aaKnown RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SUN1O94901 812 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 FYNP06241 537 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 VAV1P15498 845 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 KRT4P19013 534 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 TYMPP19971 482 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 YY1P25490 414 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 GLUD2P49448 558 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 CDK16Q00536 496 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 DPYSQ14117 519 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 ZKSCAN8Q15776 578 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 LGSNQ5TDP6 509 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 C4orf50Q6ZRC1 276 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 CAND1Q86VP6 1230 aaKnown RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SPATA2LQ8IUW3 424 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 MICALL1Q8N3F8 863 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 EDEM1Q92611 657 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 RNF34Q969K3 372 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SUSD3Q96L08 255 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 LGMNQ99538 433 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 EPAS1Q99814 870 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 PCDHB8Q9UN66 801 aa8.7□□□□□ -1.02
HMGB4-203ENST00000519684 USP15Q9Y4E8 981 aaPredicted RBP8.7□□□□□ -1.02
HMGB4-203ENST00000519684 SNX3O60493 162 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 EOMESO95936 686 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 CKBP12277 381 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 RPA3P35244 121 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 HCAR3P49019 387 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SF3A3Q12874 501 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 IFRD2Q12894 506 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 KBTBD12Q3ZCT8 623 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SPATA21Q7Z572 469 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SLC26A11Q86WA9 606 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 CTAGE3PQ8IX95 158 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 SCML4Q8N228 414 aa8.69□□□□□ -1.02
HMGB4-203ENST00000519684 COLGALT1Q8NBJ5 622 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms