RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 GPATCH2LQ9NWQ4 482 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZSCAN5DPP0CG00 497 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ETS1P14921 441 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ITIH2P19823 946 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 VCPP55072 806 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 CDH6P55285 790 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 ATAT1Q5SQI0 421 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 DRICH1Q6PGQ1 229 aaPredicted RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 PAQR9Q6ZVX9 377 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 BBS12Q6ZW61 710 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZDHHC17Q8IUH5 632 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CCDC89Q8N998 374 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ACTL9Q8TC94 416 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 NDRG1Q92597 394 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 MED10Q9BTT4 135 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SEMA4AQ9H3S1 761 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CRTAC1Q9NQ79 661 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZDHHC7Q9NXF8 308 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ABI2Q9NYB9 513 aaPredicted RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 EFR3BQ9Y2G0 817 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SLC27A5Q9Y2P5 690 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 XPO1O14980 1071 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 BEST1O76090 585 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 LRG1P02750 347 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 CHKAP35790 457 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 RPL34P49207 117 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 OTUD4Q01804 1114 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 ADIGQ0VDE8 80 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 OASLQ15646 514 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 DNAJC21Q5F1R6 531 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 RHBDF2Q6PJF5 856 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 SLC26A9Q7LBE3 791 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 GPR149Q86SP6 731 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 ALLCQ8N6M5 410 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 NKD2Q969F2 451 aaPredicted RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 HSFY1Q96LI6 401 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 RIPOR3Q96MK2 946 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 TMEM121Q9BTD3 319 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 DUSP16Q9BY84 665 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 FAM129AQ9BZQ8 928 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 C10orf88Q9H8K7 445 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 LRRC4CQ9HCJ2 640 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 TMLHEQ9NVH6 421 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 DNAJC17Q9NVM6 304 aaKnown RBP8.27□□□□□ -1.08
CLK4-203ENST00000519583 ANAPC5Q9UJX4 755 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 CDH9Q9ULB4 789 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 INSL5Q9Y5Q6 135 aa8.27□□□□□ -1.08
CLK4-203ENST00000519583 MYBPHLA2RUH7 354 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 GOLGA6L10A6NI86 522 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 VNN2O95498 520 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SHBGP04278 402 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 HNRNPA1P09651 372 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLK4-203ENST00000519583 NPR3P17342 541 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ACADSBP45954 432 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 LMNB2Q03252 620 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 CBX2Q14781 532 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 NFE2Q16621 373 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 TJAP1Q5JTD0 557 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SPDYCQ5MJ68 293 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 IZUMO3Q5VZ72 239 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ZNF771Q7L3S4 317 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 TCEAL8Q8IYN2 117 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 TTC9BQ8N6N2 239 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 UHMK1Q8TAS1 419 aaKnown RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 SLC35B2Q8TB61 432 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 PWWP2AQ96N64 755 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SEPT5Q99719 369 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 MTCL1Q9Y4B5 1905 aaKnown RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 TCF20Q9UGU0 1960 aaKnown RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 XIRP2A4UGR9 3374 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SGK1O00141 431 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 XYLBO75191 536 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SOAT2O75908 522 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 FAM163BP0C2L3 166 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 MYZAPP0CAP1 466 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 BMP1P13497 986 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 PECAM1P16284 738 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 MTHFRP42898 656 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ARSEP51690 589 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ATXN1P54253 815 aaKnown RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 HDAC4P56524 1084 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SLC8A3P57103 927 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 IFFO1Q0D2I5 559 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 TWF1Q12792 350 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 KRT81Q14533 505 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SLMAPQ14BN4 828 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SMAD2Q15796 467 aaKnown RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 P3H1Q32P28 736 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 MGAT5BQ3V5L5 792 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms