RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 PKDCCQ504Y2 493 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 DPY19L2Q6NUT2 758 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 DENND5BQ6ZUT9 1274 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPP1R14CQ8TAE6 165 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 TBCBQ99426 244 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SH3GL3Q99963 347 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 MIS12Q9H081 205 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 FAM49BQ9NUQ9 324 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 NME7Q9Y5B8 376 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 TPP1O14773 563 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 BUD23O43709 281 aaKnown RBP17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 PRKCGP05129 697 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 LYNP07948 512 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 ZCCHC18P0CG32 403 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 CRABP2P29373 138 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC1A6P48664 564 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 IGBP1P78318 339 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 PDE1CQ14123 709 aaPredicted RBP17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 PCLAFQ15004 111 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 GSTA3Q16772 222 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 RNF111Q6ZNA4 994 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 CLEC4CQ8WTT0 213 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 SPATA33Q96N06 139 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 SPATC1LQ9H0A9 340 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 RNPEPQ9H4A4 650 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 DHX35Q9H5Z1 703 aaKnown RBP17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 GPAMQ9HCL2 828 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 PIM2Q9P1W9 311 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 PSAT1Q9Y617 370 aa17.08■□□□□ 0.33
PCDHGA11-202ENST00000518882 A0A087WZ62 844 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 MCF2P10911 925 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 VAV1P15498 845 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 YY1P25490 414 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 INHBEP58166 350 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 NIPAL4Q0D2K0 466 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 SEMA5AQ13591 1074 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 ACOT1Q86TX2 421 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 WDR75Q8IWA0 830 aaKnown RBP17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 GALNT15Q8N3T1 639 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 FGD4Q96M96 766 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 QKIQ96PU8 341 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 FDXACB1Q9BRP7 624 aaPredicted RBP17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 ASB7Q9H672 318 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 PRMT7Q9NVM4 692 aaPredicted RBP17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
PCDHGA11-202ENST00000518882 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 HIC1Q14526 733 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 STEAP4Q687X5 459 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 CASC4Q6P4E1 433 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 RSPH3Q86UC2 560 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 NETO2Q8NC67 525 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 PYDC1Q8WXC3 89 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 NR1H4Q96RI1 486 aaPredicted RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 MRPL45Q9BRJ2 306 aaKnown RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 SHCBP1LQ9BZQ2 653 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 DTLQ9NZJ0 730 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 IL1RAPL1Q9NZN1 696 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 ARHGAP42A6NI28 874 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 PLIN3O60664 434 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 SIN3BO75182 1162 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 C22orf31O95567 290 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 C4orf22Q6V702 233 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 PACS1Q6VY07 963 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 TMEM110Q86TL2 294 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 FBXO16Q8IX29 292 aaPredicted RBP17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 SORT1Q99523 831 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 PNPOQ9NVS9 261 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 SORCS3Q9UPU3 1222 aa17.07■□□□□ 0.32
PCDHGA11-202ENST00000518882 PLXNA1Q9UIW2 1896 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 ADCY6O43306 1168 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 STXBP5Q5T5C0 1151 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 VWA5B1Q5TIE3 1220 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 NCBP2-AS2Q69YL0 99 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 HEATR6Q6AI08 1181 aaKnown RBP17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 C10orf107Q8IVU9 208 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 SLC35F5Q8WV83 523 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 CSPG4P5Q96PW8 444 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 KCTD15Q96SI1 283 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms