RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRPSAP2O60256 369 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ECI2O75521 394 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 CORO1AP31146 461 aaKnown RBP21.78■■□□□ 1.08
LSM6-207ENST00000515311 VIPR2P41587 438 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 SCAPQ12770 1279 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ARL13BQ3SXY8 428 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ACBD5Q5T8D3 534 aaPredicted RBP21.78■■□□□ 1.08
LSM6-207ENST00000515311 DAB2IPQ5VWQ8 1189 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 SCYL2Q6P3W7 929 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 Q6ZNB5 142 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ATP6V0D2Q8N8Y2 350 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 TRIM58Q8NG06 486 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 UBE2Q2Q8WVN8 375 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 RSPRY1Q96DX4 576 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ALS2CR12Q96Q35 445 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 TKTL2Q9H0I9 626 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 PRKAG3Q9UGI9 489 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 SLC12A6Q9UHW9 1150 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 SH3BP1Q9Y3L3 701 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 HEPACAM2A8MVW5 462 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 SPOPO43791 374 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 PALMO75781 387 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 KLKB1P03952 638 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 IL9P15248 144 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 COMTP21964 271 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 ADRA1BP35368 520 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 SLC11A2P49281 568 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 SLC25A11Q02978 314 aaKnown RBP21.77■■□□□ 1.08
LSM6-207ENST00000515311 HTR4Q13639 388 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 HADHQ16836 314 aaKnown RBP21.77■■□□□ 1.08
LSM6-207ENST00000515311 LRRC38Q5VT99 294 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 TANGO2Q6ICL3 276 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 POLNQ7Z5Q5 900 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 PSTKQ8IV42 348 aaKnown RBP21.77■■□□□ 1.08
LSM6-207ENST00000515311 RIN3Q8TB24 985 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 BPIFB1Q8TDL5 484 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 ATXN2LQ8WWM7 1075 aaKnown RBP21.77■■□□□ 1.08
LSM6-207ENST00000515311 WBP2Q969T9 261 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 HAPLN3Q96S86 360 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 GOLPH3Q9H4A6 298 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.77■■□□□ 1.08
LSM6-207ENST00000515311 STOML2Q9UJZ1 356 aa21.77■■□□□ 1.08
LSM6-207ENST00000515311 SLC9A3R1O14745 358 aaPredicted RBP21.76■■□□□ 1.07
LSM6-207ENST00000515311 SP100P23497 879 aaPredicted RBP21.76■■□□□ 1.07
LSM6-207ENST00000515311 DEKP35659 375 aaKnown RBP21.76■■□□□ 1.07
LSM6-207ENST00000515311 BOLA3Q53S33 107 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 PARM1Q6UWI2 310 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 CYP4V2Q6ZWL3 525 aaPredicted RBP21.76■■□□□ 1.07
LSM6-207ENST00000515311 CPNE8Q86YQ8 564 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 DENND1CQ8IV53 801 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 CCDC185Q8N715 623 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 TEKT4Q8WW24 435 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 FGF14Q92915 247 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 NXPE3Q969Y0 559 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 RPGRIP1Q96KN7 1286 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 LRRC3BQ96PB8 259 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 PEBP4Q96S96 227 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 ANLNQ9NQW6 1124 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 TBC1D14Q9P2M4 693 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 PCSK1NQ9UHG2 260 aa21.76■■□□□ 1.07
LSM6-207ENST00000515311 AGO1Q9UL18 857 aaKnown RBP21.76■■□□□ 1.07
LSM6-207ENST00000515311 I6L893 689 aaPredicted RBP21.75■■□□□ 1.07
LSM6-207ENST00000515311 KIF5CO60282 957 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 PAGE1O75459 146 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 MOCS2O96007 188 aaPredicted RBP21.75■■□□□ 1.07
LSM6-207ENST00000515311 KRT7P08729 469 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 TCF4P15884 667 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 IL1R2P27930 398 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 SSR1P43307 286 aaKnown RBP21.75■■□□□ 1.07
LSM6-207ENST00000515311 TAS2R40P59535 323 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 FCHO2Q0JRZ9 810 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 EFHC2Q5JST6 749 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 ADGRF1Q5T601 910 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 VITQ6UXI7 678 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 MFSD6LQ8IWD5 586 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 RHOT1Q8IXI2 618 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 FAM217AQ8IXS0 508 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 DEPDC1BQ8WUY9 529 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 CD101Q93033 1021 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 OTUB2Q96DC9 234 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 C1orf74Q96LT6 269 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 THG1LQ9NWX6 298 aaKnown RBP21.75■■□□□ 1.07
LSM6-207ENST00000515311 FZD10Q9ULW2 581 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 HYOU1Q9Y4L1 999 aa21.75■■□□□ 1.07
LSM6-207ENST00000515311 LOC730098B7Z3J9 87 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 PSTPIP1O43586 416 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 ACSL4O60488 711 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 ERMARDQ5T6L9 678 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 PEX26Q7Z412 305 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 NT5DC3Q86UY8 548 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 ADHFE1Q8IWW8 467 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 TTC16Q8NEE8 873 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 DDX50Q9BQ39 737 aaKnown RBP21.74■■□□□ 1.07
LSM6-207ENST00000515311 KXD1Q9BQD3 176 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 SNRNP25Q9BV90 132 aaKnown RBP21.74■■□□□ 1.07
LSM6-207ENST00000515311 IRX2Q9BZI1 471 aaPredicted RBP21.74■■□□□ 1.07
LSM6-207ENST00000515311 IGSF9Q9P2J2 1179 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 AP4E1Q9UPM8 1137 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 NUMBLQ9Y6R0 609 aa21.74■■□□□ 1.07
LSM6-207ENST00000515311 PSMC3P17980 439 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms