RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 FAM122AQ96E09 287 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 CPXM1Q96SM3 734 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 STK33Q9BYT3 514 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 MARCH2Q9P0N8 246 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 CACNA1HO95180 2353 aa11.52□□□□□ -0.57
UBE2D3-232ENST00000514755 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 LTFP02788 710 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 ADH5P11766 374 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 CYP11B1P15538 503 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 CORO1AP31146 461 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 MAGEA9P43362 315 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 ZNF165P49910 485 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 JAM2P57087 298 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 UBXN1Q04323 297 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 CSTF1Q05048 431 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 LRRC32Q14392 662 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 TAF5Q15542 800 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 MEA1Q16626 185 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 ANO4Q32M45 955 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 DGKKQ5KSL6 1271 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 FKBP15Q5T1M5 1219 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 TAF3Q5VWG9 929 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 TADA2BQ86TJ2 420 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 NOP9Q86U38 636 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 IRGQQ8WZA9 623 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 OTUB2Q96DC9 234 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 PRMT8Q9NR22 394 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 SPHK2Q9NRA0 654 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 ABCC13Q9NSE7 274 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 PLK2Q9NYY3 685 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 AGO1Q9UL18 857 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 R4GN57 208 aa11.51□□□□□ -0.57
UBE2D3-232ENST00000514755 NEDD8-MDP1E9PL57 170 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 K7EQS6 105 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 ERBB2P04626 1255 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 TPM2P07951 284 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 TDGF1P13385 188 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 DRD1P21728 446 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 PITX1P78337 314 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 COG7P83436 770 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 AMPD2Q01433 879 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 GAD2Q05329 585 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 KDSRQ06136 332 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 DMWDQ09019 674 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 SYPL2Q5VXT5 272 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 LUZP1Q86V48 1076 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 ETFBKMTQ8IXQ9 262 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 RNF139Q8WU17 664 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 SLC20A1Q8WUM9 679 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 BHMTQ93088 406 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 NAP1L5Q96NT1 182 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 NAT10Q9H0A0 1025 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 LHX5Q9H2C1 402 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 CBX8Q9HC52 389 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 ZDHHC4Q9NPG8 344 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 KIAA1549LQ6ZVL6 1849 aa11.5□□□□□ -0.57
UBE2D3-232ENST00000514755 SMTNL1A8MU46 457 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 K7ESF4 209 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 AXIN1O15169 862 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 HOXC11O43248 304 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 TULP3O75386 442 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 GFPT2O94808 682 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 FBXO21O94952 628 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 MMEP08473 750 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 NCAM1P13591 858 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 KRT9P35527 623 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 NBL1P41271 181 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 ACADSBP45954 432 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 SEC13P55735 322 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 C2CD6Q53TS8 623 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 EMC10Q5UCC4 262 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 MSANTD2Q6P1R3 559 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 TOGARAM2Q6ZUX3 1019 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 FAM183BPQ6ZVS7 135 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 SPEM1Q8N4L4 309 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 RPLP0P6Q8NHW5 317 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 DQX1Q8TE96 717 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 FAM149B1Q96BN6 582 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 PPP1R13BQ96KQ4 1090 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms