RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MMEP08473 750 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 TMEM253P0C7T8 217 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 IRF1P10914 325 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 GZMAP12544 262 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 CHRNB2P17787 502 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 TCP1P17987 556 aaKnown RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 CD72P21854 359 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 GJA4P35212 333 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 GALK1P51570 392 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 SLC6A3Q01959 620 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 ARID5AQ03989 594 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 UBXN2BQ14CS0 331 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 DHCR24Q15392 516 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 ELF2Q15723 593 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 RHBDF2Q6PJF5 856 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 TRIM72Q6ZMU5 477 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 LRRC57Q8N9N7 239 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 MSANTD4Q8NCY6 345 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 C1orf131Q8NDD1 294 aaKnown RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 CLEC4CQ8WTT0 213 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 UBXN4Q92575 508 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 WBP2Q969T9 261 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 FAM149B1Q96BN6 582 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 C18orf8Q96DM3 657 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 AGPAT1Q99943 283 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 TLR10Q9BXR5 811 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 LTB4R2Q9NPC1 389 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 ASNSD1Q9NWL6 643 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 RNF14Q9UBS8 474 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 SFMBT1Q9UHJ3 866 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 HBS1LQ9Y450 684 aaKnown RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 CACNA1HO95180 2353 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 GREB1Q4ZG55 1949 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 TRDMT1O14717 391 aaKnown RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 STC2O76061 302 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 MTA2O94776 668 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 MOCS3O95396 460 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 KLKB1P03952 638 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 HMBSP08397 361 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 H2AFZP0C0S5 128 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 NCAM1P13591 858 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CTHP32929 405 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CHKAP35790 457 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 MAGEA9P43362 315 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 GABRB2P47870 512 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 SOX9P48436 509 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 HARS2P49590 506 aaKnown RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 FMO1Q01740 532 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 GAD2Q05329 585 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 FZD5Q13467 585 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 TRIP4Q15650 581 aaPredicted RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 PTPN20Q4JDL3 420 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 DGKKQ5KSL6 1271 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 MEI1Q5TIA1 1274 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CWF19L1Q69YN2 538 aaKnown RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 MSANTD2Q6P1R3 559 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 H2AFVQ71UI9 128 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CREG2Q8IUH2 290 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 BBS7Q8IWZ6 715 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 ZNF687Q8N1G0 1237 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 TMEM105Q8N8V8 129 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 SLC20A1Q8WUM9 679 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 AZIN2Q96A70 460 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 CLDN23Q96B33 292 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 PLD4Q96BZ4 506 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 PCDHB18PQ96TA0 734 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 PRRX2Q99811 253 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 FOXQ1Q9C009 403 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 POPDC2Q9HBU9 364 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 WDR35Q9P2L0 1181 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 RAB21Q9UL25 225 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 NDRG2Q9UN36 371 aaKnown RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 NAALADL1Q9UQQ1 740 aa8.66□□□□□ -1.02
CCL28-204ENST00000514421 MTF2Q9Y483 593 aaPredicted RBP8.66□□□□□ -1.02
CCL28-204ENST00000514421 ZNF638Q14966 1978 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 CTAGE15A4D2H0 777 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 ENC1O14682 589 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 RRP9O43818 475 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 HSF2BPO75031 334 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 ADH1CP00326 375 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 ERBB2P04626 1255 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DCNP07585 359 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 CTAGE8P0CG41 777 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 UNGP13051 313 aaPredicted RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 DRD1P21728 446 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 CORO1AP31146 461 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 GBP1P32455 592 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 NOS2P35228 1153 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms